Gene Tfu_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2112 
Symbol 
ID3581047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2472362 
End bp2473204 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID637685809 
Productputative aminotransferase 
Protein accessionYP_290168 
Protein GI72162511 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT GGATCTCCGG AGCCGGGTAC GGCTCCGGCC GCGTAGTGGA CGCACGTGAA 
GCACGGCTGC CAGCCCTCGA CCATGGCATC ACGGTCGGCG ACGGGGTCTT TGAGACGGTT
AAGGCCGTGG GCGGCCAAGC ATTCGCGCTC ACCCGGCACC TGCAGCGCCT CGCCCGGTCC
GCGCGCGGCC TGGGACTGGG GGAACTCGAC CTCGATCACC TCCGCGACGG GGTGCACCAG
GCCTTGGCCG CCAACCCGGA CACCGATCCC GGACGGGTCC GCATCACTGT GACGGCGGGA
CTGGGACCGC TGGGCTCGGA GCGGACCGGA GGGGAACTGA CCGCCATGGT GGCGGTGGGG
CCGTTCGCGC AGCCCGCACC CACGACCGAC GTGGTGGTCG TGCCGTGGAC TCGCAACGAG
AACGGCGCGC TGAGCGGCCT GAAGACGACG TCGTATGCCG AGAACGTGCG CGCACTCGCC
TATGCGCGCC AGCGCGGGGC CGGGGAGGCG ATCTTCGCCA ACACTGTGGG CAACCTGTGC
GAAGGCACGG GAAGCAACAT CTTCGTCGTC CTCGACGGGC GGCTGGTCAC TCCTCCGCTG
TCGGCGGGGC CCTTGGCGGG GATCACCCGG GAACTGGTCC TCGAATGGGT GGGCGGTGCG
GAAGAAGACA TCCCCATGGC GGCGCTCTCC CGGGTCAGCG AGGCGTTTCT GACCTCCACC
GGGCGCGACG TGCAGCCGAT CCGCGCGATC GACGACCGGG TGCTCCCGGC GGCCCCGGGG
CCGGTGACCG CGGAAGCCAT GAAGGTGTTC GCGGAGCGGA GCGCAGCCGA GATCGACCCC
TGA
 
Protein sequence
MKIWISGAGY GSGRVVDARE ARLPALDHGI TVGDGVFETV KAVGGQAFAL TRHLQRLARS 
ARGLGLGELD LDHLRDGVHQ ALAANPDTDP GRVRITVTAG LGPLGSERTG GELTAMVAVG
PFAQPAPTTD VVVVPWTRNE NGALSGLKTT SYAENVRALA YARQRGAGEA IFANTVGNLC
EGTGSNIFVV LDGRLVTPPL SAGPLAGITR ELVLEWVGGA EEDIPMAALS RVSEAFLTST
GRDVQPIRAI DDRVLPAAPG PVTAEAMKVF AERSAAEIDP