| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2099 |
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| Symbol | |
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| ID | 3581033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2459917 |
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| End bp | 2461005 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685795 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_290155 |
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| Protein GI | 72162498 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.18132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAA CCCGCACCCG CAGACTCCGC AATGTCCGTA AAAGCGGACA AAACCGGATC
TACCATAGAT GGGGCGTGTG CGGGAGGGCG CCGTCAACAT CGCACACCCC ACCCAATAAG
ATCCACTTCG CATTCAAGCG TGAAGTCGTG TCCATCGAGA ACCTGGAGTC CACAGCCGTG
ACCAACACCG CCGAGAACAC AACCGAAAGC ACGGTCGGTA CCGTCCGCGT CAAACGCGGC
ATGGCCGAAC AGCTCAAGGG CGGTGTGATC ATGGATGTGG TCACGCCGGA GCAGGCCAAG
ATCGCTGAAG ACGCCGGCGC AGTCGCCGTC ATGGCGCTGG AGCGTGTCCC CGCCGACATC
CGCAAGGACG GCGGTGTGGC CCGCATGTCC GACCCGGAGA TGATCGAGGG CATCATCAAC
GCCGTGTCCA TCCCGGTCAT GGCGAAGGTC CGCATCGGCC ACTTCGTCGA AGCCCAAGTC
CTCCAGGCCC TGGAAGTGGA CTTCATCGAC GAGTCCGAGG TCCTCACCCC CGCTGATGAG
ACCAACCACA TCAACAAGTG GGACTTCACC GTGCCGTTCG TGTGCGGTGC CACCAACCTG
GGTGAGGCCC TGCGCCGCAT CGCCGAAGGC GCGGCCCTGA TCCGCTCCAA GGGAGAGGCC
GGTACCGGCA ACGTGGTCGA AGCCGTCCGC CACATGCGGC AGATCACCTC CGAGATCCGG
CGGCTCACCC AACTGGACGA CGCCGAGCTC TTCGCTGCCG CCAAGGAACT GCGGGCCCCC
TACGAACTCG TCCGGGAGGT CGCCCGGGAA GGCAAGCTGC CCGTGCCCCT GTTCTCCGCC
GGAGGCGTCG CTACCCCCGC AGACGCCGCC CTCATGCGCC AGCTCGGCGC GGAGAGCGTC
TTCGTCGGCT CGGGCATCTT CAAGTCCGGG GACCCGGCCA AGCGAGCCAA GGCCATCGTG
GAAGCCACCA CCGCCTACGA CGACCCGCAC ACCATCGCTC GGGTCTCCCG CGGCCTCGGG
GAAGCCATGG TCGGGATCAA CCTCGACGAA CTGGACGCTT CCCAGCGCTA CGCGGGCCGC
GGCTGGTAG
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| Protein sequence | MAQTRTRRLR NVRKSGQNRI YHRWGVCGRA PSTSHTPPNK IHFAFKREVV SIENLESTAV
TNTAENTTES TVGTVRVKRG MAEQLKGGVI MDVVTPEQAK IAEDAGAVAV MALERVPADI
RKDGGVARMS DPEMIEGIIN AVSIPVMAKV RIGHFVEAQV LQALEVDFID ESEVLTPADE
TNHINKWDFT VPFVCGATNL GEALRRIAEG AALIRSKGEA GTGNVVEAVR HMRQITSEIR
RLTQLDDAEL FAAAKELRAP YELVREVARE GKLPVPLFSA GGVATPADAA LMRQLGAESV
FVGSGIFKSG DPAKRAKAIV EATTAYDDPH TIARVSRGLG EAMVGINLDE LDASQRYAGR
GW
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