Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2096 |
Symbol | |
ID | 3579356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2457962 |
End bp | 2458711 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637685792 |
Product | hypothetical protein |
Protein accession | YP_290152 |
Protein GI | 72162495 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.803403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGGCC ACTCCAAATG GGCCACCACC AAGCACAAGA AGGCCGTCAT CGACGCCAGA CGAGGCAAGC TTTTCGCGAA GCTCATCAAG AACATCGAGG TGGCGGCACG TACTGGTGGC GGCGACCCCG ACGGCAACCC GACCCTCTAC GACGCTATCC AGAAGGCGAA GAAGAACTCG GTTCCGCTGG ACAACATCGA ACGTGCCCGC AAGCGCGGCG CCGGTGAAGA GGCAGGCGGT GCCGACTGGG AGACCATCAT GTACGAGGGC TACGCTCCCG GCGGCGTCGC CCTGCTCGTC GAGTGCCTCA CCGACAACCG CAACCGCGCC GCCTCCGAAG TGCGCGTCGC GGTCACCCGC AACGGCGGCT CCATGGCTGA CGCGGGCTCG GTGTCCTACC TGTTCAACCG CAAGGGCCTG GTCGTCGTCC CCAAGGAAGG CACGACCGAG GACGACGTCA CCCTCGCTGT CCTCGACGCG GGCGCTGAGG ACGTCAACGA CGTGGGCGAA GCGTTCGAGG TCATCTGCGA GCCCAGCGAC CTGGTGGCGG TGCGTACCGC CCTGCAGGAA GCGGGGATCG AATACGAGTC CGCTGAGCTG AGCTTCATTC CCAGCGTGGA AGTCCCTCTC GACGAGGAAG GCGCCCGGAA GGTGATGCGC CTCGTCGACG CTCTCGAGGA CTCCGACGAC GTGCAGAACG TCTACACCAA CGCGGACATC CCCGACGAGA TCATGGCGAA GATCAGCTAG
|
Protein sequence | MAGHSKWATT KHKKAVIDAR RGKLFAKLIK NIEVAARTGG GDPDGNPTLY DAIQKAKKNS VPLDNIERAR KRGAGEEAGG ADWETIMYEG YAPGGVALLV ECLTDNRNRA ASEVRVAVTR NGGSMADAGS VSYLFNRKGL VVVPKEGTTE DDVTLAVLDA GAEDVNDVGE AFEVICEPSD LVAVRTALQE AGIEYESAEL SFIPSVEVPL DEEGARKVMR LVDALEDSDD VQNVYTNADI PDEIMAKIS
|
| |