Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2081 |
Symbol | |
ID | 3579341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2440583 |
End bp | 2441908 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637685777 |
Product | recombination factor protein RarA |
Protein accession | YP_290137 |
Protein GI | 72162480 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGAAA CACTGTTCGA CGACGCTGGA GCCGAAGCCC ACCGGTCCCA TGAACCGCTC GCGGTGCGGA TGCGCCCGCG AACCCTGGAC GAGGTGGTGG GGCAGCGGCA CCTGCTGGGC GAGGGGAGTC CGCTGCGGCG GCTCGTGGAG GACGACGCGC CCATGGCGCT CCTCCTGTGG GGTCCGCCCG GCACGGGGAA GACCACACTG GCCACGGTGG TCAGCCGCGC TACCCGGCGA CGCTTCGTGG AACTGTCCGC GGTCACCTCG GGGGTCAAGG ACATCCGTGA CGTTGTCGAC GAGGCCCGAC GCGAGCTCGG CATGCGCGGG GTCCACACCC TGCTCTTCGT CGACGAAGTC CACCGCTTCA GCAAGACACA GCAGGACGCC CTGCTGCCCG CCGTAGAAAA CCGGTGGGTC AGCTTCATCG GCGCAACGAC CGAGAACCCG TTCTTCTCGG TCATCAGTCC GCTGCTCTCC CGCTCGCTGC TGCTCACCCT GCACGCGCAC AGCGATGACG ACATTCGCAC CGTGGTGCGC CGGGCGCTCA CCGATGAGCG CGGGCTCGCA GGCCGCTACA CCCTCACCGA GGAAGCGCTC CACCATCTCG TACGGCTGGC CGGGGGAGAC GCGCGGCGCT CCCTCACCTA TCTCGAAGCC GCCGCTCTGG TCGCGGGCGA CCGCACGGAG ATCACCGTGG CCGACGTGGA ACGCGCGGCT GACCGCACCG CCGTCCGCTA CGACCGCTCC GGTGACCAGC ACTACGACGT GGTGAGCGCG TTCATCAAGA GCATGCGCGG CAGCGACGTG GACGCAGCTC TGCACTACCT GGCCCGCATG ATCGAGGCGG GGGAGGACCC GCGGTTCATT GCCCGCCGCC TCGTGGTGCA CGCCAGCGAA GACGTGGGGA TGGCTGATCC CACGGCGCTG CAAGCAGCGG TGGCCGCGGC CCAGGCCGTC GAATTGGTCG GACTGCCGGA AGCCCGCATC AACCTCGCCC AGGCGGTCAT CCACATCGCC CTGGCCCCCA AATCCAACGC GGTGATCACC GCTATCGACC GCGCGATCAG CGACGTGCGC GCCGGCAAGC TCGGCCCGGT TCCCGCCCAT CTGCGTGACA GCCACTACCG GGGCGCTGCC GATCTCGGCC ACGGGGCGGG CTATCGCTAC CCCCACGACT ATCCCGGCGG GGTCGTGGCC CAACGGTACC TGCCTGAAGG GCTGGACGGG GCAGAGTACT ACCGGCCCAC CACCCACGGT GCGGAGCGCC GGTTCGGTGA GGTGCTGCGA CGGATTAAGG GTGTGCTGCG GGGCGGCTCC CACTGA
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Protein sequence | MSETLFDDAG AEAHRSHEPL AVRMRPRTLD EVVGQRHLLG EGSPLRRLVE DDAPMALLLW GPPGTGKTTL ATVVSRATRR RFVELSAVTS GVKDIRDVVD EARRELGMRG VHTLLFVDEV HRFSKTQQDA LLPAVENRWV SFIGATTENP FFSVISPLLS RSLLLTLHAH SDDDIRTVVR RALTDERGLA GRYTLTEEAL HHLVRLAGGD ARRSLTYLEA AALVAGDRTE ITVADVERAA DRTAVRYDRS GDQHYDVVSA FIKSMRGSDV DAALHYLARM IEAGEDPRFI ARRLVVHASE DVGMADPTAL QAAVAAAQAV ELVGLPEARI NLAQAVIHIA LAPKSNAVIT AIDRAISDVR AGKLGPVPAH LRDSHYRGAA DLGHGAGYRY PHDYPGGVVA QRYLPEGLDG AEYYRPTTHG AERRFGEVLR RIKGVLRGGS H
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