Gene Tfu_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1998 
Symbol 
ID3580735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2331773 
End bp2333299 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content68% 
IMG OID637685691 
Productputative acyl-CoA synthetase, long-chain fatty acid:CoA ligase 
Protein accessionYP_290054 
Protein GI72162397 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.222529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGT CACTCGCCAC GATCCTGGCC GAGGCTGCGC GTCGCCACCC GGAACGCACC 
GCACTCATCG CTGACGGTGA GCGGATCTCC TACGCCACCC TGTGGCACGA GTCCCTGCGC
CACGCGGCCG CCCTCCGCTC TCTCGGCGTC TCCCCCGGGG ACCGGGTCGC CCTGCTCGCA
GGCAACGTCG CCGACTTCGT CCGCTGCTAC TACGGCATCC TCGCCGTGGG CGGGACCGTC
GTCACCATCC CCCCGATGCT CCGCCCCCAA GAGGTCGCCT TCCTCCTCTC CGACACCGGG
GCGCGCCTCG TCCTCGCCCA AAGCCTGTTC GCTGACCTCG CCCACGCCGC GGTCGACGGC
AACGACGTCA CCGTGCGCAC TGTCGGGGAC CCGCAGCGGC CCGACGCGCT GGCCCCGCTC
GTGGCGGACA GCGAACCGCT GCCCTCCTAC GTGTCCCGCG CCCCCGACGA CATTGCGGTG
ATCTTCTACA CCAGCGGCAC CACGGGCGTC CCCAAAGGCG CCATGCTCAC CCACCTCAAC
CTGGTGATGA ACGCCACCGT CAACGCGTTC GACGTCCACC CCATGAGCGG CGAAGACGTC
GTCATGGGCT CCCTGCCCCT GTTCCACACC TTCGGCCAGT CAGTGGCGCT CAACACCACC
TTCCGGGTGG GCGCCACCCT CATCCTGCAG GAGCGGTTCG ACCCCGACGA AGCCATCCGG
ATGATGTGCG AGTACGGCGC CACCATCTTC GACGGCGTCC CCACCATGTT CGTCCGGCTG
GCAGAAGCCG CAGCCCACCA CACCAAACTT CCCTCCCTGC GCTTCTGTGT CTCCGGTGGC
GCTTCCCTCC CCGAAGTGGT ACTCCGCCGG TTCGAAGAAG CGTTCTCCAC CACCATCTAC
GAGGGCTACG GCCTGTCGGA GACCTCGCCC ACGGCCAGCA CCAACCAGAC GCTCTACGGC
GCCCGCGTCG GCTCGGTCGG CCACCCCATC TGGGGTGTGG AAGTGGAGAT CGCCCGCGCC
GACATCGACG ACCGGATCGA ACTCCTGCCG CGCGGCGAGC ACGGCGAAAT CGTCATCCGC
GGCCACAACG TCTTCGTCGG ATACCTCAAC CGCCCGGAGG CCACCGCCGA GGCGATCGTT
GACGGCTGGT TCCGCACCGG AGACATCGGC TTCATCGACG ACGACGGCTT CATCCACATC
GTGGACCGCA AGAAGGACCT GATCATCCGC GGCGGCTTCA ACGTCTACCC GCGCGAAGTG
GAAGAGGTCC TGCTGAAATT CCCCGGGATT TCCCAGGTAG CGGTGATCGG CGTGCCCGAC
GCCGAACTGG GTGAGGAGGT CTGCGCGGTG GTGGTGCCCG ACAAGGAGGG CGCCGTCGAC
CCCGCTGAAC TCCAGGCCTG GGCGCAGGAG CGCCTGGGCA AACACAAGTA CCCGCGCAGA
GTGGAGATCG TGACCGAGCT TCCACTGGGT CCGAGCCTCA AAGTACTCAA GCGCGAACTG
CGTGCGCGCT TCGGGGGAAA GAGCTAA
 
Protein sequence
MQLSLATILA EAARRHPERT ALIADGERIS YATLWHESLR HAAALRSLGV SPGDRVALLA 
GNVADFVRCY YGILAVGGTV VTIPPMLRPQ EVAFLLSDTG ARLVLAQSLF ADLAHAAVDG
NDVTVRTVGD PQRPDALAPL VADSEPLPSY VSRAPDDIAV IFYTSGTTGV PKGAMLTHLN
LVMNATVNAF DVHPMSGEDV VMGSLPLFHT FGQSVALNTT FRVGATLILQ ERFDPDEAIR
MMCEYGATIF DGVPTMFVRL AEAAAHHTKL PSLRFCVSGG ASLPEVVLRR FEEAFSTTIY
EGYGLSETSP TASTNQTLYG ARVGSVGHPI WGVEVEIARA DIDDRIELLP RGEHGEIVIR
GHNVFVGYLN RPEATAEAIV DGWFRTGDIG FIDDDGFIHI VDRKKDLIIR GGFNVYPREV
EEVLLKFPGI SQVAVIGVPD AELGEEVCAV VVPDKEGAVD PAELQAWAQE RLGKHKYPRR
VEIVTELPLG PSLKVLKREL RARFGGKS