Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1998 |
Symbol | |
ID | 3580735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2331773 |
End bp | 2333299 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685691 |
Product | putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase |
Protein accession | YP_290054 |
Protein GI | 72162397 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.222529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGT CACTCGCCAC GATCCTGGCC GAGGCTGCGC GTCGCCACCC GGAACGCACC GCACTCATCG CTGACGGTGA GCGGATCTCC TACGCCACCC TGTGGCACGA GTCCCTGCGC CACGCGGCCG CCCTCCGCTC TCTCGGCGTC TCCCCCGGGG ACCGGGTCGC CCTGCTCGCA GGCAACGTCG CCGACTTCGT CCGCTGCTAC TACGGCATCC TCGCCGTGGG CGGGACCGTC GTCACCATCC CCCCGATGCT CCGCCCCCAA GAGGTCGCCT TCCTCCTCTC CGACACCGGG GCGCGCCTCG TCCTCGCCCA AAGCCTGTTC GCTGACCTCG CCCACGCCGC GGTCGACGGC AACGACGTCA CCGTGCGCAC TGTCGGGGAC CCGCAGCGGC CCGACGCGCT GGCCCCGCTC GTGGCGGACA GCGAACCGCT GCCCTCCTAC GTGTCCCGCG CCCCCGACGA CATTGCGGTG ATCTTCTACA CCAGCGGCAC CACGGGCGTC CCCAAAGGCG CCATGCTCAC CCACCTCAAC CTGGTGATGA ACGCCACCGT CAACGCGTTC GACGTCCACC CCATGAGCGG CGAAGACGTC GTCATGGGCT CCCTGCCCCT GTTCCACACC TTCGGCCAGT CAGTGGCGCT CAACACCACC TTCCGGGTGG GCGCCACCCT CATCCTGCAG GAGCGGTTCG ACCCCGACGA AGCCATCCGG ATGATGTGCG AGTACGGCGC CACCATCTTC GACGGCGTCC CCACCATGTT CGTCCGGCTG GCAGAAGCCG CAGCCCACCA CACCAAACTT CCCTCCCTGC GCTTCTGTGT CTCCGGTGGC GCTTCCCTCC CCGAAGTGGT ACTCCGCCGG TTCGAAGAAG CGTTCTCCAC CACCATCTAC GAGGGCTACG GCCTGTCGGA GACCTCGCCC ACGGCCAGCA CCAACCAGAC GCTCTACGGC GCCCGCGTCG GCTCGGTCGG CCACCCCATC TGGGGTGTGG AAGTGGAGAT CGCCCGCGCC GACATCGACG ACCGGATCGA ACTCCTGCCG CGCGGCGAGC ACGGCGAAAT CGTCATCCGC GGCCACAACG TCTTCGTCGG ATACCTCAAC CGCCCGGAGG CCACCGCCGA GGCGATCGTT GACGGCTGGT TCCGCACCGG AGACATCGGC TTCATCGACG ACGACGGCTT CATCCACATC GTGGACCGCA AGAAGGACCT GATCATCCGC GGCGGCTTCA ACGTCTACCC GCGCGAAGTG GAAGAGGTCC TGCTGAAATT CCCCGGGATT TCCCAGGTAG CGGTGATCGG CGTGCCCGAC GCCGAACTGG GTGAGGAGGT CTGCGCGGTG GTGGTGCCCG ACAAGGAGGG CGCCGTCGAC CCCGCTGAAC TCCAGGCCTG GGCGCAGGAG CGCCTGGGCA AACACAAGTA CCCGCGCAGA GTGGAGATCG TGACCGAGCT TCCACTGGGT CCGAGCCTCA AAGTACTCAA GCGCGAACTG CGTGCGCGCT TCGGGGGAAA GAGCTAA
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Protein sequence | MQLSLATILA EAARRHPERT ALIADGERIS YATLWHESLR HAAALRSLGV SPGDRVALLA GNVADFVRCY YGILAVGGTV VTIPPMLRPQ EVAFLLSDTG ARLVLAQSLF ADLAHAAVDG NDVTVRTVGD PQRPDALAPL VADSEPLPSY VSRAPDDIAV IFYTSGTTGV PKGAMLTHLN LVMNATVNAF DVHPMSGEDV VMGSLPLFHT FGQSVALNTT FRVGATLILQ ERFDPDEAIR MMCEYGATIF DGVPTMFVRL AEAAAHHTKL PSLRFCVSGG ASLPEVVLRR FEEAFSTTIY EGYGLSETSP TASTNQTLYG ARVGSVGHPI WGVEVEIARA DIDDRIELLP RGEHGEIVIR GHNVFVGYLN RPEATAEAIV DGWFRTGDIG FIDDDGFIHI VDRKKDLIIR GGFNVYPREV EEVLLKFPGI SQVAVIGVPD AELGEEVCAV VVPDKEGAVD PAELQAWAQE RLGKHKYPRR VEIVTELPLG PSLKVLKREL RARFGGKS
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