| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1994 |
|---|
| Symbol | |
|---|
| ID | 3580731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2326990 |
|---|
| End bp | 2327892 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685687 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_290050 |
|---|
| Protein GI | 72162393 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGCG ACTCTCCTGG GCAGTCTGCA CCGGGTCCGT TCTCCCGGGC TGCGGCGCTC
GTCCGCGCCG CGGGCACTGC CATCCCGGCG ACCTGGCTGG TCGGGGTGAG CATCCTGTCG
GTCCAGTTCG GCGCAGGGGT GGCGAAGAAC CTGTTCGCGG TCCTCCCCCC AAGCACCGTG
GTGTGGCTGC GCCTGCTGGC TTCGGCCCTG GTGCTGCTGT GCTTCGCCCC TCCCCCACTG
CGCGGGCACT CTCGCACGGA CTGGCTGGTC GCGGTCGGTT TCGGCACGTC GCTGGCGGTC
ATGAACTACG CCATCTACGA ATCGTTTGCG CGCATCCCGC TGGGCGTGGC CGTGACCATC
GAATTCCTGG GCCCGCTGGC CGTGGCCGTG GCGGGATCGC GCCGCTGGCG GGACCTGGTG
TGGGTGGTGC TCGCCGGCAC GGGGGTTGCG CTGCTGGGAT GGGACGACGG CGGGGTCACC
CTGGCAGGGG TGGCGTTCGC CGCCCTCGCG GGCGCTGCGT GGGCGTGCTA CATCCTGCTC
AGCGCAGCCA CCGGCCGACG CTTCCCCGGG ACTTCCGGAC TGACGGTGGC CAGTGTGATC
GGCGCAGTGC TCGTCGCGCC GATGGGCCTC GCCCACAGCA GCCCGGCCCT GCTCGACCCG
AGCGTGCTGC TGACCGGTCT TGCCGTGGGG CTGCTCTCCT CGGTCATCCC CTACTCCCTG
GAAATGCAGG CGTTGCGCCG CATTCCGCCC GGGGTGTTCG GCATCCTGAT GAGCCTAGAA
CCGGCGGCGG CCGCACTCGT GGGCCTGGTC CTGCTCGGGG AATTCCTCAC CGTCGCCCAG
TGGGCCGCGG TGGCCTGCGT GGTGGTCGCC AGTGTGGGTG CGACCCGCTC CGCCCGGCTG
TGA
|
|---|
| Protein sequence | MNSDSPGQSA PGPFSRAAAL VRAAGTAIPA TWLVGVSILS VQFGAGVAKN LFAVLPPSTV
VWLRLLASAL VLLCFAPPPL RGHSRTDWLV AVGFGTSLAV MNYAIYESFA RIPLGVAVTI
EFLGPLAVAV AGSRRWRDLV WVVLAGTGVA LLGWDDGGVT LAGVAFAALA GAAWACYILL
SAATGRRFPG TSGLTVASVI GAVLVAPMGL AHSSPALLDP SVLLTGLAVG LLSSVIPYSL
EMQALRRIPP GVFGILMSLE PAAAALVGLV LLGEFLTVAQ WAAVACVVVA SVGATRSARL
|
|---|
| |