| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1890 |
|---|
| Symbol | |
|---|
| ID | 3579473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2214910 |
|---|
| End bp | 2215677 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637685582 |
|---|
| Product | putative secreted protein |
|---|
| Protein accession | YP_289946 |
|---|
| Protein GI | 72162289 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2138] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.813593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACAGCG CCCCGGCCGG GATCCCGCTT GTCGCGGTCG CCCACGGCAG CGCTGACCCG
CGGGCGGCAG CCACCGTGGA AGCGCTCTTC GCCCGGGTGC GGCACCAGCG TCCGGACCTG
GACGTGCGGG TGAGCTATCT CGACCACGTT GCTCCCCCGC CAGACGAGGT TTTGGCTGCG
CTCGCCGCGG AAGGAGCGAG GGAAGTCGTG GTGCTGCCGA CCCTGTTGAC GGCCGCCTAC
CACAGCAAAG TGGACTTGCC CCGCGTCCTG GAGCGGGTGC GTGCCGACTC TCCGTGGCTC
CGGATCCGCT ACGCCACCAC CCTCGGCCCG CACCCTCTCC TGTTGGATGC GCTCGAACGG
CGTCTCGCGG AGGCGGGGGC CACAGCCAAC CCAGACACGG CGGTGGTGCT GGCCGCTGCC
GGGTCGAGCG ACCCGCACGC CAACGCCGTG GTCGCCGCGG CAGCTCGCGA CCTGGCTGCC
CGCGGTCCGT GGCGTGAGGT GCGGACCGCG TTCGCGTCCG CGGCCCGCCC GTCCCTCGCC
GAAGCGGTGG AGGAGCTGCG CACGGCGGGC GCCCAGCGCG TAGCAGTCGC CAGCTACCTG
CTGGCGGAAG GCTTCTTCGC GGACCGGGTA CGGACCCACT GCACGGCTGC GGGGGCACAG
ATCGTCTCCG CTCCTCTCGG GGACTGCCCG GAGCTCGCTG CGGTGGTGCT GCACCGTTAC
GACGAAGCGC TCCGCGCCGC ACCCGTGTCC GAATCAGCCG CCCCGTAG
|
|---|
| Protein sequence | MNSAPAGIPL VAVAHGSADP RAAATVEALF ARVRHQRPDL DVRVSYLDHV APPPDEVLAA
LAAEGAREVV VLPTLLTAAY HSKVDLPRVL ERVRADSPWL RIRYATTLGP HPLLLDALER
RLAEAGATAN PDTAVVLAAA GSSDPHANAV VAAAARDLAA RGPWREVRTA FASAARPSLA
EAVEELRTAG AQRVAVASYL LAEGFFADRV RTHCTAAGAQ IVSAPLGDCP ELAAVVLHRY
DEALRAAPVS ESAAP
|
|---|
| |