| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1875 |
|---|
| Symbol | |
|---|
| ID | 3579458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2198063 |
|---|
| End bp | 2199136 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685567 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289931 |
|---|
| Protein GI | 72162274 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGAAC AACCCTCCCG CACCCCCGCC TCCACTCCTT CCCTCGGCGC ATCCCTGATC
CGCGACTGGG ACGAGCCTGC TGACGGCCAG GAGCTCCCGC CACCGGAGTG GGGACGCCCG
CCACGGTCCC GCACTACCGC CACGGTCTGG TGGTTTGTGC TGTTCATCGC GGTGCTGCTT
GCGGGACAGG CGCTGCTGGC CGGACGGTTG ACCCACGAGG CATTCCTGGC GTGGGCCACG
GTCTTCACCG CCATCAGCCT GCAGGCACTG CCGTTCCTCG TGTTCGGGGT GGCGCTGTCT
GCCGCCATCA CCGCGCTGGT CCCGCCACAG GTGTGGCAGC GGATCGTTCC GCGCCGGGCG
GCGCTCGCGG TCCCCGCGGC CGGGCTCTCC GGTGCGGTGC TCCCCGGGTG CGAATGCGCG
TCGGTGCCGG TCGCTGGCGG GCTGATCCGG CGCGGGGTGC CCCCGGCGGC TGCGCTCACC
TTCCTGCTCG CCGCGCCCGC CATCAACCCG GTCGTGATCG TGGCGACCAT GGTCGCCTTC
CCCGGGCAGC CGGAGATGGC TGTGGCGCGT TTTCTCGCTT CCTTGGGGGC CGCGGTCGCG
GTGGGCTGGC TGTGGGCCGC ATTCGGCAGG TCCGACTGGC TGCGGCTGCC CCGCACCGGG
GGAGGGAGAA CCACGGGGTG GCGGGCGTTT GCCGACACGA TGCGGCACGA CCTGATGCAC
GCCGGAGGGT TCCTCGTCTT GGGGGGACTG GTTGCCTCGG GGGTGAACGT GCTGGTGCCG
CGGGAGTGGC TGGCGGCTGT CGCCGACACT CCGGTGCTTT CCGTGCTGGC GCTGGCGCTG
CTGGCCGTGG TGCTGTCGAT CTGCTCGGAA GCCGACGCGT TCGTCGTGGT GAGCTTCACC
GAGTTCTCTG CTACCGCCAA ACTCGCTTTC CTCGTGGTTG GGCCGATGGT GGACCTGAAG
CTCATCGCCT TGCAGGCCGG GGCGTTCGGC TGGGCGTTCG TACGCCGCTT CGTCCCCCTC
ACCCTGGCAG CGACCCTGCT GGGCACGGTG CTGGTGGGAG GACTGCTGCT GTGA
|
|---|
| Protein sequence | MSEQPSRTPA STPSLGASLI RDWDEPADGQ ELPPPEWGRP PRSRTTATVW WFVLFIAVLL
AGQALLAGRL THEAFLAWAT VFTAISLQAL PFLVFGVALS AAITALVPPQ VWQRIVPRRA
ALAVPAAGLS GAVLPGCECA SVPVAGGLIR RGVPPAAALT FLLAAPAINP VVIVATMVAF
PGQPEMAVAR FLASLGAAVA VGWLWAAFGR SDWLRLPRTG GGRTTGWRAF ADTMRHDLMH
AGGFLVLGGL VASGVNVLVP REWLAAVADT PVLSVLALAL LAVVLSICSE ADAFVVVSFT
EFSATAKLAF LVVGPMVDLK LIALQAGAFG WAFVRRFVPL TLAATLLGTV LVGGLLL
|
|---|
| |