| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1825 |
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| Symbol | |
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| ID | 3579116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2127006 |
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| End bp | 2130482 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685517 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_289881 |
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| Protein GI | 72162224 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTC GACTCTCCTT CCGTGAAGTC CTCGGTTCCC GCGTCCTCGT CGCCGACGGG
GCGATGGGAA CGATGCTTCA GACATACGAC CTGAGCATGG ACGACTTCGA GGGACACGAG
GGGTGTAACG AGGTCCTCAA CATCACCCGG CCCGACGTGG TCCGGGAGAT CCACGAGGCC
TACCTGCAGG CCGGCGTCGA CTGTGTCGAA ACCAACACGT TCGGCGCGAA CTTCGGAAAC
CTCGGCGAAT ACGGCATCGC GGAACGCACC TACGAACTGG CTGAAGCCGG TGCCCGCCTG
GCCCGCGAAG CCGCCGACGC GTACACCACT GCCGATCACG TCCGCTACGT CCTCGGCTCT
GTGGGGCCCG GGACGAAGCT GCCCACCCTT GGCCACGCCC CGTACGCTGT GCTGCGCGAC
CACTACGAAC AGTGCGCACG CGGGCTCATT GACGGCGGTG TCGACGCGAT CGTGATCGAA
ACCTGCCAGG ACTTGCTGCA GGCGAAAGCC GCGATCGTGG GGGCACGGCG GGCCCGCAAG
GCCGCGGGTA CCGACACGCC GATCATCGTC CAGGTGACGA TTGAAACCAC GGGGACCATG
CTGGTGGGCT CCGAGATCGG TGCGGCACTG ACCTCGCTGG AACCGCTAGG GGTCGACATG
ATCGGCCTCA ACTGCGCTAC CGGTCCAGCA GAGATGAGCG AGCACCTGCG CTACCTCTCC
CACCACTCCC GCATCCCCCT CTCCTGCATG CCGAACGCGG GCCTGCCTGA GCTGGGGGCG
GACGGGGCCG TCTACCCGCT GCAGCCGCAT GAGCTCACCG AAGCACACGA CACGTTCATC
CGCGAGTTTG GCCTGGCCCT GGTGGGCGGC TGCTGCGGCA CCACCCCTGA GCACCTCGCC
CAAGTGGTGG AGCGGGTGCA GGGACGCGGC GTGCCGGACC GCAAACCGCA CGTCGAACCC
GCCGCCGCCT CTATCTACCA GAGCGTCCCG TTCCGCCAGG ACACCAGCTA CCTGGCGATC
GGGGAACGCA CCAACGCCAA CGGCTCCAAG GCGTTCCGCG AAGCCATGCT CGCGGAACGC
TACGACGACT GTGTGGAGAT CGCCCGCCAG CAGATCCGCG ACGGCGCGCA CATGCTCGAC
CTGTGCGTCG ACTATGTGGG ACGCGACGGG GTGCGCGATA TGCGGGAGCT GGCTTCCCGG
CTGGCCACCG CCTCCACGCT GCCGCTCGTA CTGGACTCCA CCGAAGTAGC GGTACTGGAA
GCTGGACTGG AGATGCTGGG CGGGCGCGCC GTGCTCAACT CGGTCAACTA CGAGGACGGC
GACGGCCCTG ACTCCCGGTT CGCCAAGGTC GCCGCGCTGG CGGTGGAGCA CGGGGCGGCC
CTCATGGCGC TGACCATCGA CGAGCAGGGG CAGGCGCGGA CCGCGGAACG GAAAGTGGAG
GTCGCCGAGC GGCTCATCCG GCAGCTCACC ACCGAGTACG GCATCCGCAA GCACGACATC
ATCGTGGACT GCCTGACCTT CACGATCGCA ACCGGACAGG AGGAGTCGCG GCGCGACGCT
CTGGAAACCA TCGAGGCGAT CCGTGAACTG AAGCGGCGCC ACCCGGACGT GCAGACCACG
CTGGGCGTGT CCAACGTCTC CTTCGGGCTC AACCCGGCTG CCCGCATTGT GCTCAACTCG
GTGTTCCTCC ACGAGTGCGT CCAGGCCGGC TTGGACTCCG CGATCGTGCA CGCCTCCAAG
ATCCTGCCGA TCAACCGCAT CCCCGAGGAG CAGCGGCAGG TGGCGTTGGA CATGATCTAC
GACCGCCGCA CCGATGACTA CGACCCGCTG CAACGCTTCC TGCAGCTTTT CGAAGGAGTG
GACGCGCAGG CGATGCGCGC CTCGCGCGAG GAAGAGCTGG CCGCGCTGCC GCTGTGGGAG
CGCCTGGAGC GCCGTATCGT CGACGGGGAA GCCGCCGGCA TGGAAGCGGA CCTGGACGAA
GCGCTCACCC AGCGGTCCGC GCTGGACATC ATCAACACCA CGCTGCTGGC GGGGATGAAG
ACCGTCGGCG ACCTGTTCGG CTCCGGGCAG ATGCAGCTCC CGTTCGTGCT GAAGTCGGCC
GAGGTGATGA AGGCCGCCGT GGCCTATCTG GAGCCGCACA TGGAGAAGGT GGACGGCGAC
CTCGGCAAGG GGCGGATCGT GCTGGCCACG GTCAAGGGCG ACGTCCACGA CATCGGCAAG
AACCTTGTGG ACATCATCCT GTCCAACAAC GGCTACGAGG TCATCAACCT GGGGATCAAG
CAGCCCATCT CCGCGATTCT GGAGGCGGCC GAGCGGCACC GCGCCGACGT GATCGGCATG
TCCGGCCTGC TGGTGAAGTC CACGGTGGTG ATGCGGGAGA ACCTGGAGGA GATGAACGCC
CGCGGGGTCG CTGACCGCTA CCCGGTCCTG CTGGGCGGTG CCGCGTTGAC CCGCTCCTAT
GTGGAACAGG ACCTCGCCGA GATTTTCAAA GGCGAGGTGC GCTATGCCCG CGACGCTTTT
GAAGGCTTGA AGCTCATGGA CGCCATCATG GCGGTCAAAC GCGGGGTGAA GGGGGCTAAG
CTGCCGCCGC TGCGCACCCG CCGGGTGAAG CGGGGCGCAC AGCTTACCGT CACCGAGCCG
GAGAAGATGC CGACGCGCAG CGACGTGGCC ACCGACAACC CGGTGCCGAC CCCGCCGTTC
TGGGGGGACC GCATCTGCAA GGGGATTCCG CTCGCCGACT ACGCGGCTTT CCTGGATGAG
CGCGCCACGT TCATGGGCCA GTGGGGGCTG CGCGGCTCCC GCGGCGACGG CCCCACCTAC
GAGGAGCTGG TGGAGACGGA GGGGCGGCCG CGGCTGCGCA TGTGGCTGGA CCGGATCCAG
ACCGAGGGGT GGCTGGAGCC GGCGGTCGTC TACGGCTACT ACCGCTGCTA CAGCGAAGGC
AACGACCTGG TCGTCCTCGG TGAGGACGAA AACGAGCTGA CCCGGTTCAC GTTCCCGCGG
CAGCGCCGCG ACCGGCACCT GTGCCTGGCT GACTTCTTCC GCCCCAAGGA GTCCGGGGAA
CTGGACACGG TGGCGTTCCA GGTCGTCACC GTCGGTTCGA CGATCAGCAA GGCGACCGCG
GAGCTGTTCG AGAAGAACGC GTACCGGGAC TACTTGGAGC TCCACGGGCT GTCCGTGCAG
TTGACGGAGG CACTCGCGGA GTACTGGCAC ACCCGGGTCC GCGCCGAGCT GGGCTTCGCC
GGGGAGGATC CCGACCCGGC CGATTTGGAC GCCTACTTTA AGCTCGGCTA TCGAGGCGCC
CGTTTCTCCC TGGGGTACGG GGCCTGCCCC AACTTGGAGG ACCGCGCCAA GATCGTGGCC
CTGCTGCGTC CGGAACGGGT TGGGGTGACG TTGTCCGAGG AGTTCCAGCT TGTTCCCGAA
CAGTCCACTG ACGCGATCGT TGTCCATCAC CCCGAGGCGA AATACTTCAA CGTATGA
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| Protein sequence | MSARLSFREV LGSRVLVADG AMGTMLQTYD LSMDDFEGHE GCNEVLNITR PDVVREIHEA
YLQAGVDCVE TNTFGANFGN LGEYGIAERT YELAEAGARL AREAADAYTT ADHVRYVLGS
VGPGTKLPTL GHAPYAVLRD HYEQCARGLI DGGVDAIVIE TCQDLLQAKA AIVGARRARK
AAGTDTPIIV QVTIETTGTM LVGSEIGAAL TSLEPLGVDM IGLNCATGPA EMSEHLRYLS
HHSRIPLSCM PNAGLPELGA DGAVYPLQPH ELTEAHDTFI REFGLALVGG CCGTTPEHLA
QVVERVQGRG VPDRKPHVEP AAASIYQSVP FRQDTSYLAI GERTNANGSK AFREAMLAER
YDDCVEIARQ QIRDGAHMLD LCVDYVGRDG VRDMRELASR LATASTLPLV LDSTEVAVLE
AGLEMLGGRA VLNSVNYEDG DGPDSRFAKV AALAVEHGAA LMALTIDEQG QARTAERKVE
VAERLIRQLT TEYGIRKHDI IVDCLTFTIA TGQEESRRDA LETIEAIREL KRRHPDVQTT
LGVSNVSFGL NPAARIVLNS VFLHECVQAG LDSAIVHASK ILPINRIPEE QRQVALDMIY
DRRTDDYDPL QRFLQLFEGV DAQAMRASRE EELAALPLWE RLERRIVDGE AAGMEADLDE
ALTQRSALDI INTTLLAGMK TVGDLFGSGQ MQLPFVLKSA EVMKAAVAYL EPHMEKVDGD
LGKGRIVLAT VKGDVHDIGK NLVDIILSNN GYEVINLGIK QPISAILEAA ERHRADVIGM
SGLLVKSTVV MRENLEEMNA RGVADRYPVL LGGAALTRSY VEQDLAEIFK GEVRYARDAF
EGLKLMDAIM AVKRGVKGAK LPPLRTRRVK RGAQLTVTEP EKMPTRSDVA TDNPVPTPPF
WGDRICKGIP LADYAAFLDE RATFMGQWGL RGSRGDGPTY EELVETEGRP RLRMWLDRIQ
TEGWLEPAVV YGYYRCYSEG NDLVVLGEDE NELTRFTFPR QRRDRHLCLA DFFRPKESGE
LDTVAFQVVT VGSTISKATA ELFEKNAYRD YLELHGLSVQ LTEALAEYWH TRVRAELGFA
GEDPDPADLD AYFKLGYRGA RFSLGYGACP NLEDRAKIVA LLRPERVGVT LSEEFQLVPE
QSTDAIVVHH PEAKYFNV
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