Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1793 |
Symbol | |
ID | 3580473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2093167 |
End bp | 2094786 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685487 |
Product | hypothetical protein |
Protein accession | YP_289851 |
Protein GI | 72162194 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGCTC TGCTGATCCG CAACGCCACC GTGATCACCA TGGACGAGGC GAACCCGCGT GCTGCAGCGC TGGCCGTCCG GGACGGCCGG ATCCTGCTCG CGGGAACTGA GGAGGCGGCT CGGGCCGCGG TGGGTCCCGA CGCGGTGGAG ATTGATGCGG GCGGGCGCAC GGTTCTGCCG GGGTTTATCG ACCCGCACAA CCACCTGCTG TCCACCGCAG AGTCGCTGGC GGCGCTCGAC GCCCGCTATC CGACGGTGAC GAGTGTCGCC GACCTGGTCG CGGCGGTGGC GGCCGCGGCG GAGCGCACCC CGCCGGGGCA GTGGATCCGC GCGTTCGGGA TGGACGACGC CAAATACCCG GAGGGCCGTC CCACCCGGCG CGTGCTGGAC GAGGCCACCA CCGAGCATCC GGTGATCATC TACCACGTTT CCGGGCACCA GGCGGTGGTC AACTCTGCCG CGCTCGCGCA GAGCGGGGTC ACCGATGACG TCACCGACCC GCCTGGTGGG GCGTTCCTGC GGGACGAGGC GGGCCGCCTG ACCGGGATGG TGGTGGATTC GGCGATGGAG CTGCTGCTGC CGCTGGCGGT GGACATCGGC TGCCACGGGC CGAACTTCCA CACCGACCTG CCCGCTGAGC AGTTGCTGGG CTGGCTGCAG GATGCCGCGG ACACGTATCT CGCCGCCGGG GTGACCACGG TGTGCGACCC GCAGGTTTCC GCGCGGGAGC TGCGGGTCTA CCGGGCAGCG CACGCGGCGG GGACTCTGCC GGTGCGGACC TTCGGGCTGC CGTTGTCCCA CCAGTTGGAC GCGTTCCACT CTGTGGGGCT GGCGGCGCCG TTCGGCGACG ACTGGCTGCG TCTGACCGGG ATGAAGTTCT ACTCGGACGG CACTCTGCTG GGCGGCACGG CTCGGTTCAG CGTGCCGTAC GGGGAGCACG GCGAGTTCAC CGGCAGCATG TACCACGAGC CCGAGGAGCT GGTGGACTTG GTGCGGCGCG CGGCCGAGCA GGGCTGGCAG GTCGCCATCC ACACGCAGGG CGACTGGGCG ATGGAGCAGA CCCTGGCCGC GATCGACGCG GCGGTCAAAG TGGCCGGGCC TGACCCGCGG CCGCGGATCG AGCACTGCGG CTACCCGACG CCTGAGCAGA CGCGGCGGTT CACCGACTAC GGGGTGATCC CGGTGAACCA GCCGAACTTC CTCTACGACA GCGGCGGCGA CTTCCTGCGC CGCTTGGGGG AGCGGGCGCA CCGGCTGCAG CCTATGCGGG AGGAGCTGGA CTTGGGGCTG CGTCCGGTGC TGTCGAGTGA CTCGTTCGTG TCCAGCCTGC GTCCGATGGA CACGGTCGCC AACGCGGTCC GCCGCACCAC CCGCGAGGGT GTGGAGATCG GCGCCGACCA GGCGATCAGC GTGCACGAGG CGCTGCGCGC CCACACGTGG GACGCGGCGT ATGCGCTGGG CGTGGAGGAC CGGCTGGGCG CGTTGAAGCC GGGCTATCTC GCAGACGTGG TGGTGTTGGA CCGCGACATT GAAGCCATCC CCACCGAGGA GCTCAGCGAC GTGAACGCGT GGCTGACCGT GCTGGACGGT CGAATCGCCT ACCGGGCGGA AGAGCAGTAA
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Protein sequence | MSALLIRNAT VITMDEANPR AAALAVRDGR ILLAGTEEAA RAAVGPDAVE IDAGGRTVLP GFIDPHNHLL STAESLAALD ARYPTVTSVA DLVAAVAAAA ERTPPGQWIR AFGMDDAKYP EGRPTRRVLD EATTEHPVII YHVSGHQAVV NSAALAQSGV TDDVTDPPGG AFLRDEAGRL TGMVVDSAME LLLPLAVDIG CHGPNFHTDL PAEQLLGWLQ DAADTYLAAG VTTVCDPQVS ARELRVYRAA HAAGTLPVRT FGLPLSHQLD AFHSVGLAAP FGDDWLRLTG MKFYSDGTLL GGTARFSVPY GEHGEFTGSM YHEPEELVDL VRRAAEQGWQ VAIHTQGDWA MEQTLAAIDA AVKVAGPDPR PRIEHCGYPT PEQTRRFTDY GVIPVNQPNF LYDSGGDFLR RLGERAHRLQ PMREELDLGL RPVLSSDSFV SSLRPMDTVA NAVRRTTREG VEIGADQAIS VHEALRAHTW DAAYALGVED RLGALKPGYL ADVVVLDRDI EAIPTEELSD VNAWLTVLDG RIAYRAEEQ
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