| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1790 |
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| Symbol | |
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| ID | 3580470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2091369 |
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| End bp | 2092217 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637685484 |
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| Product | proteasome subunit beta |
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| Protein accession | YP_289848 |
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| Protein GI | 72162191 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.568871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGAAG CGTTCATGGG TAGTGGACGG CTGCCCGCCG CGTTCATGAG TCCGGGGCCC
ACGTCGTTCG TCGACTTCCT CCGTCAGGTG AGTCCCGACC GGCTGCCCAA TTTCGCCAAC
CTTCCCTCCG ACAGCTCCCC CGCCCACTTG ACTCCCGAAG CCACGACGAT CGTGGCTGTT
GTCTTTTCCG GCGGTGTCGT GCTCGCGGGC GACCGTAGAG CCACGTCCGG CAATGTGATC
GCCAACCGGG ATATGGACAA GCTGTTCCGC ACCGACGAGT TCTCTGCGGT CGGTATTGCG
GGATCGGCCG GAATCGGTAT TGAACTGGCC AAGCTCTTCC AGGTGGAACT GGAGCACTAC
GAGAAGCGGG AAGGGCGCCC GCTGTCGCTG GAAGGCAAAG CCAACCGGCT GGCCACCATG
ATCCGCTCCA ACCTGGGGCT GGCCATGCAG GGGTTTGTGG TGGTCCCGCT GCTCGTGGGC
TACGACACGT CCCGCGGAGA AGGCCGCATT TTCAGCTACG ACCCGGTGGG CGGCTGCTAC
GAGGAGCACC GCTACCACGC CATCGGGTCC GGTTCGGTCT ACGCCAAAGG GGCTTTGAAG
AAGCTGTACC GCGATGACCT TGCCGAGACC GACGCTGCAC TGGTTGCGCT GCAGGCACTC
TACGACGCGG CCGACGACGA CTCCGCCACG GGTGGTCCTG ACCTGCACCG CAAGATCTAC
CCGCTGGTCG ACGTCATTAC CGAGGACGGC CACCGTCGGA TGTCGCACGA GGAAGTCGAA
TCGTTGGCGC AGACGGTGGT AGCCGCCCGC GCTGAACACC CCGACGGACC CACCGCCCCG
GTGAGCTGA
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| Protein sequence | MSEAFMGSGR LPAAFMSPGP TSFVDFLRQV SPDRLPNFAN LPSDSSPAHL TPEATTIVAV
VFSGGVVLAG DRRATSGNVI ANRDMDKLFR TDEFSAVGIA GSAGIGIELA KLFQVELEHY
EKREGRPLSL EGKANRLATM IRSNLGLAMQ GFVVVPLLVG YDTSRGEGRI FSYDPVGGCY
EEHRYHAIGS GSVYAKGALK KLYRDDLAET DAALVALQAL YDAADDDSAT GGPDLHRKIY
PLVDVITEDG HRRMSHEEVE SLAQTVVAAR AEHPDGPTAP VS
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