| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1717 |
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| Symbol | |
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| ID | 3581656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1998398 |
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| End bp | 1999477 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637685411 |
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| Product | putative racemase |
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| Protein accession | YP_289775 |
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| Protein GI | 72162118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.640537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATCA CCGAGATCAC CGCTGAGGCG TACCGGCTGC CGCTGCACCG GGCCTGGGAC
GGCGGGGTGG ACCGCAACGA CGTGGTCGTG GTCCGAGTGG CCACCGACAC CGGACAGACC
GGTACCGGGT TCGCCTGGAC TCCGCTGATC GGGGCGGGGG CGGTGCTGGC CCTGCTCCGC
AACGACTGCC CGGCTGTGCT GCTGGGCCGC GATGCGAATC CGTACGCCCG CTGGGAGGAG
CTGCGCTGGC ACTTGCGGGA AGCCGGAACC AGCGGGCTCA CCCTCATGGC GATCGCCGCG
GTAGACATCG CGCTGTGGGA CCTCACCGCA CGGGCCGCCG GGGCAAGCCT GGTGGACCTG
ATCGGGAGGC GGCGCGACCG GGTGGCCGCC TACGGGAGCG GAGTCAACCT CGACTACTCC
CTGGACGAGC TGCTGGAGCA GGTGCGAGGC TGGCTTGCCG CCGGCCACCG CGCGGTCAAG
ATCAAAGTGG GCTCGCCCGA GCTGGAACGC GATGTGGAAC GGGTCGCAGC CGTCCGGGAG
CTGATCGGAC CGGACCGGCT CCTCATGATC GACGCCAACC AGCGCTGGGA CCTGCCGACA
GCGATCCGGG CCCTCGCCGC CATGGAACGG TTCGACCCGT ACTTCGTGGA AGAGCCGCTG
CCCGCCGATG ACCTGGCAGC GCATGCGCGG CTGCGGGCAC ACACCCGGAT TCCGCTGGCG
ATCGGGGAGA ACCTGCGCAC GATCGCCGAA TTCGAAACCG CGCTGCAACT GGGGGTGTGT
GACATCGCCC AGCCCAACGC GGTGCGAGTG GGCGGTATCA CCCCGTTTCT CCGGATCGCG
GAGCTGGCCG CCCGGCACAG CGTGCCGGTA GCCCCCCACC TGCTGCCGGA ACTCTCCACC
CAACTAGCGT TGTGCCTCCC GAGGGTGGCC ATGGTCGAAG ACATCGACCG CGCCTCGTTC
GCGGCGCTGG GAGCGTTGGC CCGCCCGAGC GGTGTGGAGA TCAGCGCGGG GTGGGCGACC
GCGCAGACCG GCCCGGGCCA CGGACTGGAG TTCGCGGCCG ACCTGGCCCC CATCGGGTGA
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| Protein sequence | MRITEITAEA YRLPLHRAWD GGVDRNDVVV VRVATDTGQT GTGFAWTPLI GAGAVLALLR
NDCPAVLLGR DANPYARWEE LRWHLREAGT SGLTLMAIAA VDIALWDLTA RAAGASLVDL
IGRRRDRVAA YGSGVNLDYS LDELLEQVRG WLAAGHRAVK IKVGSPELER DVERVAAVRE
LIGPDRLLMI DANQRWDLPT AIRALAAMER FDPYFVEEPL PADDLAAHAR LRAHTRIPLA
IGENLRTIAE FETALQLGVC DIAQPNAVRV GGITPFLRIA ELAARHSVPV APHLLPELST
QLALCLPRVA MVEDIDRASF AALGALARPS GVEISAGWAT AQTGPGHGLE FAADLAPIG
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