| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1714 |
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| Symbol | |
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| ID | 3580227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1994073 |
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| End bp | 1995575 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637685408 |
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| Product | hypothetical protein |
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| Protein accession | YP_289772 |
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| Protein GI | 72162115 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.007229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCTC TCGTTGCAGG CTTCAGCTCG CTGCTGGACC CCACCGTCCT GTCGTGCATC
GCCCTAGGAG CGGTCCTAGG CATGCTGGTC GGTGCTTTTC CCGGTATCAC CGCGACCATG
GCTGTCGCGT TGGCCAGCGG CTTCACCCTG ACTTTGGATC CTCTGCCGGG TCTGGCGGTG
CTGCTGACCA TCTACGTGTC CTCCAACTTC GGCGACCGGG TCCCCGCGAT CCTGGTCAAC
ACCCCGGGAA CACCCGCCTC CATCGCCACG ACCTTCGACG GCTATGCGAT GGCTCAACAG
GGCAAGGCCG GCCTGGCATT GACCTCGTCA GCGTTCGCCT CGGCGGTCGG CACGTTCGCC
GGCCTCCTCC TGCTGATGTT TGCGGCCATC CCCTTGTCAC GACTGGCCCT GCAATTCGGC
CCTGCCGAGA TGTTCGCCCT GGTCGTCTTC GGTTTGACGA TGATGATCGG GGTTTCAGGG
GGCCGAGTCG TCAAAGGGCT CATGGCCGGT GCCTTCGGGC TCCTCCTCGG TGCGGTCGGC
CGTGACCCGA TCACCGGCGA CCTCCGATTC ACCTTCGGCC TCGTAGAACT GTCCGACGGG
GTTCCCTTCA TCGCCGCCAT CATCGGCCTG TTCGGTATCG CCGAAGTCTT CGACCAGATC
ATCACCCACC GCTCCGGAAG CAGCGCAGCA CCGATCACCC AGTTCGGTAA GTGGTTCCCC
ACTCGCGCGG ACTGGCGCAC CATGCTCAAA CCGCTGGCTG TGGGCAGCGG AGTGGGTGGT
GTGGTCGGCG TAGTTCCCGC CACCGGCGGC GACATCGCCG GGATTCTCGC CTGGGATCAG
GCACGGCGCG TCTCCGCCCA CCCGGAGAAG TTCGGCAAAG GATCCCTCGA AGGCCTCACC
GCTGCCGACA CCGCCTCCAA CGCCACCTTG GGCGGGTCTA CCACCACCTC GCTGGCTCTC
GGTATCCCCG GTGACTCGGT GATGGCTGTG ATGATCGGCT CCATGATCGT CTGGGGCATC
CAGCCCGGGC CGTCACTCTT CACCAGGAAC CCTGAACTGG TCTACAGCAT CGCGGGGATC
ATGATCGTGG CCACGCTGCT GGCCCTCGGA CTGAGCTTGC TCCGCATGCG CAGCGTCGCC
AAACTGCTCG ACCTGCCGCG CCACTTTCTG TGGACGATCA TCCTGATCTT CTGCATGGTC
GGCACCTACG CCGTCAACAA CAGTATTTTC GACGTCGGCG TGATGCTGCT CTTCGGCCTC
GTCGGCCTGT TCATGCGGCG TTTCTCCATC CCGGCCGGCC CGGTCGTGCT CGGCCTCCTG
CTCGGCAAGC TTGCCGAGAG CAATCTGCGC CGCGCCTTGG AGATCGGCGG GGTGTCCAAC
ATCCTGACCA GCCCGATCGC CGTGGCAATT CTGGCGGTAA GCCTGCTGGC TCTGGTGCTG
CCCGCGCTGC GCGCCATGCG GCAGCGCCGC CGCACCACCC CCGCGACCCC CGTCGCTGAG
TGA
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| Protein sequence | MSPLVAGFSS LLDPTVLSCI ALGAVLGMLV GAFPGITATM AVALASGFTL TLDPLPGLAV
LLTIYVSSNF GDRVPAILVN TPGTPASIAT TFDGYAMAQQ GKAGLALTSS AFASAVGTFA
GLLLLMFAAI PLSRLALQFG PAEMFALVVF GLTMMIGVSG GRVVKGLMAG AFGLLLGAVG
RDPITGDLRF TFGLVELSDG VPFIAAIIGL FGIAEVFDQI ITHRSGSSAA PITQFGKWFP
TRADWRTMLK PLAVGSGVGG VVGVVPATGG DIAGILAWDQ ARRVSAHPEK FGKGSLEGLT
AADTASNATL GGSTTTSLAL GIPGDSVMAV MIGSMIVWGI QPGPSLFTRN PELVYSIAGI
MIVATLLALG LSLLRMRSVA KLLDLPRHFL WTIILIFCMV GTYAVNNSIF DVGVMLLFGL
VGLFMRRFSI PAGPVVLGLL LGKLAESNLR RALEIGGVSN ILTSPIAVAI LAVSLLALVL
PALRAMRQRR RTTPATPVAE
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