| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1673 |
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| Symbol | |
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| ID | 3581293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1946306 |
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| End bp | 1947880 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685367 |
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| Product | phosphodiesterase/alkaline phosphatase D |
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| Protein accession | YP_289731 |
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| Protein GI | 72162074 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCGTC GCACGCTCTC TGCAGTCCCG CCGTCCCGAC GCCGCTTCCT GGGCATCGGT
GCTGCCTCTG CGGCCGCCGT AGCCCTGGGG ACCGGTCTGT TTCCCGCCCC GTCCCACCGC
TCCGCCTCCG CCAGCTCCTA CCCTTTCACC CTTGGGGTCG CCTCCGGGGA CCCGCACCCC
GACGGGGTCG TCCTGTGGAC CCGCCTGGCC CCCGACCCGC TCGCCCCCGA CGGCCGGGGC
GGCATGGGCG ACGAGGAGGT TACGGTCCGC TACCAGGTTG CAACAGACGA GCGCTTCAGC
CGCGTGGTCC ACGAGGGAGA AGCCGTCGCC TCCCCCGAAC TCGCCCACTC CGTCCACCCC
GAGATCACCG GTTTGGAACC GGACCGCGAA TACTTCTACC GGTTCCAAGC CCTGGGGGAG
ATCAGCCCGG TAGGGCGCAC CCGCACCGCA CCCGACCCCC GAACCGAGCC GGCTCTGCTC
CGGTTCGCCT TCGTCTCCTG CCAGAAGTGG GACGACGGCT ACTACACCGC CTACCGCCAC
CTGGCCGAAG AAGACCTGGA CCTCGTCGTG CACTTGGGCG ACTACCTCTA CGAGTACCCG
GTAAGCGGAG CCATCCGCCA GGTCGAGATC CCCGACTACC TGGCCACCGA GACGGAGACT
CTCGAGCAGT ACCGGGTGCG CTACGGCCTG TACAAGAGCG ACCCCGACCT GCAGGCGGCG
CACGCTCGCT TCCCGTGGAT CGCCGTGCTC GACGACCACG AAGTTAAGAA CAACTGGGCC
GGGGCCCACA CCGGTGAGGC CGAGCTGGCC CGCCGCGCGG CCGCATTTCA GGCGTACTAC
GAGAACCTGC CGCTGCGCCG CTCCGCCCTC CCCGTCGGGC CTGCCATGGG ACTGCACCGC
CGGATCTCGT GGGGCCAGTT GGCGGATTTC ACGATCCTCG ACACCCGCCA GTACCGCGAC
GCCCACGCCT GCCACGACGG AAAGTCCGCC ACCTGCTCTG CACGGCTCAA CCCCGGCCGC
AGCCTGCTCG GCACGGAGCA GCGCGAGTGG TTGCTGCACG GGTTCGAGAC CTCGCCCGCC
CGCTGGCACG TGCTGGGCAA CCAAGTGCCG ATGACGCAGA GCGACCTCGA TCCGGGGCCT
GCGACCCGGG TGTGGTTGGA CTCCTGGGAC GGCTATGTCG CAGAGCGCGA CCTGGTGCTG
GCCGAGGCTG CGGCACGCGG GGTACGCAAC CTGGTGGTGG TGACGGGAGA CCGGCACCAG
AACTACGCGG CCGAACTCAA AGCCGACTAC GCCGACCCGG ATTCTGCGAC CGTGGGCACG
GAATTCGTCG GCACCTCGAT CAGTAGCAGC CAGGACGGGC AGGACCTGGG GGAACAAGGG
CAGGCTCTGC TCGCGGCCAA CCCGCACCTG CGGTTCGTCA ACGAGCAGCG CGGCTATGCG
CGGTGCTTCG TGACCCCCGA GCTGTGGCAG ACCGACTTCC GCGTGGTGCC GTACGTGACC
TCACCCGGGG CTCCCGTCTC CACCCGGGCG TCTTTTGTCG TCGAAGACGG GCATCCCGGG
CTGCTCGAAG GGTGA
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| Protein sequence | MVRRTLSAVP PSRRRFLGIG AASAAAVALG TGLFPAPSHR SASASSYPFT LGVASGDPHP
DGVVLWTRLA PDPLAPDGRG GMGDEEVTVR YQVATDERFS RVVHEGEAVA SPELAHSVHP
EITGLEPDRE YFYRFQALGE ISPVGRTRTA PDPRTEPALL RFAFVSCQKW DDGYYTAYRH
LAEEDLDLVV HLGDYLYEYP VSGAIRQVEI PDYLATETET LEQYRVRYGL YKSDPDLQAA
HARFPWIAVL DDHEVKNNWA GAHTGEAELA RRAAAFQAYY ENLPLRRSAL PVGPAMGLHR
RISWGQLADF TILDTRQYRD AHACHDGKSA TCSARLNPGR SLLGTEQREW LLHGFETSPA
RWHVLGNQVP MTQSDLDPGP ATRVWLDSWD GYVAERDLVL AEAAARGVRN LVVVTGDRHQ
NYAAELKADY ADPDSATVGT EFVGTSISSS QDGQDLGEQG QALLAANPHL RFVNEQRGYA
RCFVTPELWQ TDFRVVPYVT SPGAPVSTRA SFVVEDGHPG LLEG
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