| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1653 |
|---|
| Symbol | |
|---|
| ID | 3580489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1923023 |
|---|
| End bp | 1923856 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637685347 |
|---|
| Product | chloride peroxidase |
|---|
| Protein accession | YP_289711 |
|---|
| Protein GI | 72162054 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTG TCACCGTGGG AACAGAGAAC TCTTCCGCTA TTGGGGTCTA CTACGAAGAC
CACGGCAGCG GGCAACCGGT CATCCTCATT CACGGATACC CGCTCAACGG CCACTCCTGG
GAGAAGCAGG AGCGGGCACT GCTCGAAGCG GGCTACCGGG TCATCACCTA CGATCGGCGC
GGCTTCGGCC GGTCAACCCA CACCACGACC GGCTACGACT ACGACACGTT TGCCGCCGAC
CTGAAAGCTC TCATCGACCA CCTGAGCCTC TCCGACGTCA TCCTCGTCGG CTTCTCCATG
GGAACCGGTG AGGTGGTCCG CTATCTGAGC CGCTACGGTT CTGACCGGGT CAGCAAGGCT
GTGCTGCTTG GCGCACTCCA GCCGTTCCTT CTCAAAACCG GCGACAACCC CCAGGGCGTG
GACGCCGAAG TGTTCAAGAA GATCGAAGAG GCGATCCTCG ACGACCGGTT CGCCTACTTC
AAGAACTTCC TCGACAACTT CTACAACGTC GACGTCTTCG GCGGGAAGCG GATCAGCAAA
GAAGCATGGC AGAACAGCTT CAACGTCGCC GCTTCCTCCT CCGCATACGC CACCTACGCC
TGCGTGCAGG CCTGGCTCAC CGACTTCCGC CCCGACCTGC CGCGCATCGA CGTTCCCGTG
CTCGTCATGC ACGGCTCAGC CGACCGCATC CTGCCGATCA GCGCTACCTC GGACCGGCTG
CCCGACCTGC TCGGCGAAGT GGAGTACATG GTGGTGGATG GCGGGCCGCA CGCGATCAAC
TGGACCCACG CCGAGGAAGT CAACAGTGCA CTGCTCGGCT TCCTGCGGGG ATGA
|
|---|
| Protein sequence | MSFVTVGTEN SSAIGVYYED HGSGQPVILI HGYPLNGHSW EKQERALLEA GYRVITYDRR
GFGRSTHTTT GYDYDTFAAD LKALIDHLSL SDVILVGFSM GTGEVVRYLS RYGSDRVSKA
VLLGALQPFL LKTGDNPQGV DAEVFKKIEE AILDDRFAYF KNFLDNFYNV DVFGGKRISK
EAWQNSFNVA ASSSAYATYA CVQAWLTDFR PDLPRIDVPV LVMHGSADRI LPISATSDRL
PDLLGEVEYM VVDGGPHAIN WTHAEEVNSA LLGFLRG
|
|---|
| |