| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1641 |
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| Symbol | |
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| ID | 3580477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1907932 |
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| End bp | 1909254 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685335 |
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| Product | valine-pyruvate aminotransferase |
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| Protein accession | YP_289699 |
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| Protein GI | 72162042 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.320192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGTTG ATCCCCGAGA GTCCCAACCC AACCCGCAGG GTTCACGTAT CGACCCCTAC
GTCGACGCTT ACGCGGCACG CGCCGCAGGG ATGGTGGCCT CGGAAGTCCG CGCACTGTTC
GCCGTCGCTT CCCGACCCGA AGTGGTCTCC CTCGCCGGGG GAATGCCCAA CATCAGCGCC
CTGCCGCTGG ACGCTCTCGG GGAACTCGCT CAGCAGGTCG TCGTCGAACA GGGCCGCACC
GCCCTGCAGT ACGGCTCAGC CCAAGGCGAC CCGGTGCTGC GCCAGCAGAT CTGCGAGGTT
ATGGCCCTCG AGGAGATCGA CGCCAGTCCG GACGACGTGA TCGTCACCGT CGGTTCCCAG
CAGGCACTGG ACCTCGTCAC CAAAGTCTTC GTCGACCCCG GCGACGTGGT GCTGACCGAG
GGGCCCACGT ACGTGACCGC GATCAACACC TTCGCCGCCT ACCAGGCCCA CATCGAACAC
ATCCCCATGG ACGACGACGG GGTCATCCCC GAAGCGCTCG AGGAACGTCT CGCCGCCCTG
ACCCGTCAAG GAAAACGGGT CAAGTTCTTC TACACGGTGC CGACCTTCAA TAACCCTGCC
GGGGTCACCC TGGCCCCGGA GCGGCGCCAC CGCGTCCTGG AGATCTGCGA GCGGTTCAAC
CTGCTGGTCG TCGAAGACAA CCCGTACGGC CTGCTGCGGT ATGAAGGCGA TCCGGTGCGT
CCGCTCCGCG CCGAGTCGGA ACGCAACGTC ATCTACCTGG GGTCTTTTTC GAAGACGCTG
TCCCCCGGGT TCCGGATCGG CTGGGCGCTG GCTCCGGCAG CGGTGCGTGA CAAGCTCATC
TTGGCCGTCG AGTCGGCGAT GCTCAGCCAC TCCAACTTCA ACCAGGCGAT TGTGGGCCGC
TACCTGGCCA CCCAGCCGTG GCCGGAACAG ATCAAAGAGT TCAACGAAAT GTACCGGGCC
CGCCGCGACG CCATGCTGTC GAGCCTGGAC GCGCTCATGC CGCCGGAATG CTCGTGGACC
CGGCCCAGCG GCGGCTTCTT CGTGTGGGCG ACCCTCCCCG AAGGGATCAA TTCCAAGGCG
ATGCTGCCCC GCGCCGTCAA CGAACGGGTC GCCTACGTTC CGGGAACCGG CTTCTACTAC
GGTGGCGGCG GAGAACGCAA CATGCGGTTG TCGTTCTGCT ATCCCACTCC CGAACAGATC
CGCGAGGGAG TGCGCCGCCT GGTGAGTGTC CTGGAGAGCG AGATCGAGCT GCGTGACACC
TTCGGTGGTG TCCCCTCCTC CACCGGGCGG GGCGGCGAGG CGCCAGCGCC TGACCTGCCG
TAG
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| Protein sequence | MSVDPRESQP NPQGSRIDPY VDAYAARAAG MVASEVRALF AVASRPEVVS LAGGMPNISA
LPLDALGELA QQVVVEQGRT ALQYGSAQGD PVLRQQICEV MALEEIDASP DDVIVTVGSQ
QALDLVTKVF VDPGDVVLTE GPTYVTAINT FAAYQAHIEH IPMDDDGVIP EALEERLAAL
TRQGKRVKFF YTVPTFNNPA GVTLAPERRH RVLEICERFN LLVVEDNPYG LLRYEGDPVR
PLRAESERNV IYLGSFSKTL SPGFRIGWAL APAAVRDKLI LAVESAMLSH SNFNQAIVGR
YLATQPWPEQ IKEFNEMYRA RRDAMLSSLD ALMPPECSWT RPSGGFFVWA TLPEGINSKA
MLPRAVNERV AYVPGTGFYY GGGGERNMRL SFCYPTPEQI REGVRRLVSV LESEIELRDT
FGGVPSSTGR GGEAPAPDLP
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