| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1630 |
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| Symbol | |
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| ID | 3580408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1894204 |
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| End bp | 1896342 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685324 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
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| Protein accession | YP_289688 |
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| Protein GI | 72162031 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGA CCAACCACGC CCCGAACCCT GCAACCGCTG CCGCAGACGC CCCCGTGCTC
AGCGTCACCG ACCTACACGT CCGGATCCCC ACCAGCGAAG GGGACGTCCA CGCCGTGCGC
GGCATCTCCT ACCACCTGCG CCGCGGCGAA GCCCTCGGCA TCGTGGGCGA ATCCGGATCC
GGCAAGTCCG TGTCCGCACT CGCTGTCCTG GGACTCCTGC CCCGCACGGC CCGCGTCTCC
GGTTCGATCC AGGTCGCCGG CTACGAAATC GTCGGCCGCA AAGACGCAGA ACTGACCCGG
ATCCGCGGCG CCCGCGTCGC CATGGTCTTC CAAGACCCGC TGACCTCGCT CAACCCCGTC
CACCCGATCG GCACGCAGAT CACCGAGGCG ATCCACGCCC ACCGGGACGT GTCCCGCGCT
GCCGCCCGCG AACGCGCCGT GGAACTCCTG CGGACCGTCG GCATCCCCCA ACCGGAGCAG
CGTATCGACG CTTACCCGCA TGAACTCTCC GGCGGCATGC GCCAGCGGGT TGTGCTCGCC
ATCGCCATGG CCAACGACCC CGACGTGATC ATCGCCGACG AGCCCACCAC CGCCCTGGAC
GTGACCGTCC AAGCACAAGT CCTCGACGCA CTGCAGGCCG CACGCCGCGC TACCGGTGCC
GCGCTCGTGC TCATCACCCA CGACCTGGGC ATCGCCGCCG GACACGTCGA CCGGGTCGCG
GTGATGTATG CGGGACGCAT CGTGGAAACC GGAAGCGTGG ACGAGGTCTT CTCCTCCCCG
CAAATGCCCT ACACTCTCGG CCTGCTGGGC AGCCAGCCAC GCATGGACGC CGCACCCCAC
AGCAGGCTCG TCCCCATCCC CGGCGCCCCG CCCTCCCCGG ACCACCAGCT CTCCGGATGC
GCGTTCGCGC CCCGCTGCCC GCTCGCGAAA CCGGTGTGCC GTACCAGCAC CCCGCAGCTC
ACTGCGGTCA GCGACACCCA TGCCGCAGCC TGCCACTTCG CTGACCAACT GGCCGGTATC
CGACCGGAAG AGTTGTTCGC CTCTAATACG GCTCCGAGTG CGAACCCGCT TCCAGAGGCG
GTGGAGCGCA CCCGCAGCCG CGGCGAGCCC GTGCTCGTCG CCGAAGGCCT CGTCAAACAC
TTCCCGGTGC GCTCCAAAGG GCTGATCCGG CGCCGCAGCG GGGAGATCCA CGCGGTATGC
GACGTCTCTC TCACCCTGCA CGCCCACCAG ACCTTGGCGC TGGTAGGCGA ATCCGGGTGC
GGGAAGTCCA CCACGGCCCG GATGCTGCTC AACCTCATCC CTCCGACCCG CGGCCGGGTG
TCCTACCGCG GGCAGACTCT CACCGGACTG TCCTCGTCCC GGATGCGGCC GTTGCGTCGC
AGCATGCAGA TCGTGTTCCA AGACCCGTTC GCCTCCCTGG ACCCGCGGAT GACCGTGTTC
GATGCGGTCG CTGAACCGCT GCGCGTCCAC GGCCAGTTCC GCAACGGGGG AGCAGAACGG
GTCCGGGAGC TGTTCCGGCT CGTCGGTTTG GACCCGGCCC ACGGCAACCG GTACCCGCAC
GAGTTCTCTG GCGGCCAACG GCAGCGCGTC GGGATTGCAC GCGCCCTCGC CTTAGAACCT
GAAGTGCTCG TCTTGGACGA GCCGGTCTCC GCGCTGGACG TGTCCGTCCA AGCCGGGGTG
ATCAACCTCC TCGAGGAACT CCAGGAGCGG CTGGGGCTTT CCTACCTCTT CGTCTCCCAC
GACCTGGCCG TGGTCCGGCA CCTCGCTGAC CAGGTCGCGG TGATGTACCT GGGGCGGATC
GTGGAGACCG CACCCGTGGA ACGCCTGTTC ACCGCGGCAG CCCACCCCTA TACCCAGGCG
CTGATCTCCG CGGTGCCGAT CCCGGACCCG CGCCGGGAGC GTGCCCGGCA GCGGATTGTG
CTCCGCGGCG ACGTGCCCAG CCCGATGCAT CCCCCCTCGG GCTGCCGGTT CCGCACCCGC
TGTCCCGTGT TCGCCCGTCT CACGGAAGCA GAGCAGGCCC GCTGCGCAAC AGAGGTGCCG
ACCCTGGCCG ACCACGGCAA CGACCACGCT GTGGCATGCC ACTACGCCGT CCCCCGCTCC
CCGCTCGGCG ACGCTTTCCC ACCCCACCGC ACACCGTGA
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| Protein sequence | MTSTNHAPNP ATAAADAPVL SVTDLHVRIP TSEGDVHAVR GISYHLRRGE ALGIVGESGS
GKSVSALAVL GLLPRTARVS GSIQVAGYEI VGRKDAELTR IRGARVAMVF QDPLTSLNPV
HPIGTQITEA IHAHRDVSRA AARERAVELL RTVGIPQPEQ RIDAYPHELS GGMRQRVVLA
IAMANDPDVI IADEPTTALD VTVQAQVLDA LQAARRATGA ALVLITHDLG IAAGHVDRVA
VMYAGRIVET GSVDEVFSSP QMPYTLGLLG SQPRMDAAPH SRLVPIPGAP PSPDHQLSGC
AFAPRCPLAK PVCRTSTPQL TAVSDTHAAA CHFADQLAGI RPEELFASNT APSANPLPEA
VERTRSRGEP VLVAEGLVKH FPVRSKGLIR RRSGEIHAVC DVSLTLHAHQ TLALVGESGC
GKSTTARMLL NLIPPTRGRV SYRGQTLTGL SSSRMRPLRR SMQIVFQDPF ASLDPRMTVF
DAVAEPLRVH GQFRNGGAER VRELFRLVGL DPAHGNRYPH EFSGGQRQRV GIARALALEP
EVLVLDEPVS ALDVSVQAGV INLLEELQER LGLSYLFVSH DLAVVRHLAD QVAVMYLGRI
VETAPVERLF TAAAHPYTQA LISAVPIPDP RRERARQRIV LRGDVPSPMH PPSGCRFRTR
CPVFARLTEA EQARCATEVP TLADHGNDHA VACHYAVPRS PLGDAFPPHR TP
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