| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1621 |
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| Symbol | |
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| ID | 3580399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1880409 |
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| End bp | 1881875 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685315 |
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| Product | xylanase/chitin deacetylase |
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| Protein accession | YP_289679 |
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| Protein GI | 72162022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGTGGA AAACCTGGAA AAGGCAACTG GTCAGCTGGT GCGCGGTCAT GGCGGTCACA
GCGCCGCTCA CTGCTTGTAC GTCGTGGGAA GAACTCGGCG CCCTCAAAGG AGGACGCGAA
AGACTCGCTG ACGGCTTGCA CACGATCGAA CCCACGTGGA TCGACGGATT GACCGTTGCC
GAACACTCCG TGTCCGTCGA CGGTACGACG ATCACCAGCA AATATCCGGT GGTTCCAGGA
GCCACCGACT TCACCGTCGA CATCCGCACC ACGATGGCCG AGCGGGAGAC CGAATTCATC
ACCCAAGGGG ACGGCGGGGA ATTGACCCAG CACGCCGAGT TCCTCGTCGC CTCGAACGGA
GTGCTGGGTG CCCGGGTGAT CTCCCAGTAC GAAGACCGGG TCGACGCCTC CACCCACTGG
TACGACGTGG CCTCCGGAGA GGCACTGCCG TGGACTGCGC TCCTCAACGG AGACCAAGCG
GTCGACCAGC TCGCCGCCCG GGTCGCGCTA GCGCTGCACA AGGACCACGA TGTGGCCGCT
GACGCCATGC CCGACGGGCT GCCCACCCCG CAAGACGAAC TGCCGGACGC GGAAGACACC
GAGCCCGCGC TGGTCGACCC CGAAGCAGTG TGGAAGAGCG CGGAAAAGCA CGAAGACTCG
CCGCTCGCAG ACCTCGGCTT CGACGCTGCG GGGGATCTCG TGGTGAGCTT CAGCCCTGGC
GAAGTCGCCG ACAACGAGGT CCAGGTGACC GTGGCCGACA GTGAACCGCT GCTGTCCCGG
TTCGGGCGCA GCGCCCGGCA AGCCGTCCGG GACGGGGAGG AGAGCCTGGA GCTGCCCTCG
AACACCGTCC CCACCTACAC CATCGACTGC GACCGGGTGC CGTGCGTGGC TTTGACGTTC
GACGACGGGC CAGGAGCGGA CACCCCGCTC CTGCTGAAGC ACTTGGAGGC CTACTCGGCG
AAGGCCACCT TCTACGTGCT GGGCCAGCTC ACCGAAGGCG ACCCGGACAC GGTACGGGCC
GCGATGGAAG CCGGGCACGA GATCGCCAAC CACTCCTGGA AGCACGACAA CCTCGCCACC
AAGAGCGGGA ACGCCGTGCA GGACGACATT GAGAAGACGT GGAAGGCGAT CGAGGAGGCG
ACCGGGGTGA CGCGGACCAC GGTTCGCCCG CCCTACGGTT CGTACAACGA AACCACCCAG
GCCAGCATCG ACTACCCGCT GATCCTGTGG GACGTCGACA CCCTGGACTG GCAGCACCGG
GACACCGAGA AGACTATCGA AGCGGCCGTG TCCGGCACCC GGCCCGGCAG CATCGTGCTC
TTCCACGACA TCCACCGGCC CACGGTGGAC GCCATCCCCG AAGTGCTCAG CCAGCTGCAC
GCCAAGGGGT ACCACTTTGT GACGGTCACC GAGCTCTTCG GTGGTCGGAC TCTCGAACCC
GGCGTGGCTT ACACTCGGCG CGACTGA
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| Protein sequence | MVWKTWKRQL VSWCAVMAVT APLTACTSWE ELGALKGGRE RLADGLHTIE PTWIDGLTVA
EHSVSVDGTT ITSKYPVVPG ATDFTVDIRT TMAERETEFI TQGDGGELTQ HAEFLVASNG
VLGARVISQY EDRVDASTHW YDVASGEALP WTALLNGDQA VDQLAARVAL ALHKDHDVAA
DAMPDGLPTP QDELPDAEDT EPALVDPEAV WKSAEKHEDS PLADLGFDAA GDLVVSFSPG
EVADNEVQVT VADSEPLLSR FGRSARQAVR DGEESLELPS NTVPTYTIDC DRVPCVALTF
DDGPGADTPL LLKHLEAYSA KATFYVLGQL TEGDPDTVRA AMEAGHEIAN HSWKHDNLAT
KSGNAVQDDI EKTWKAIEEA TGVTRTTVRP PYGSYNETTQ ASIDYPLILW DVDTLDWQHR
DTEKTIEAAV SGTRPGSIVL FHDIHRPTVD AIPEVLSQLH AKGYHFVTVT ELFGGRTLEP
GVAYTRRD
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