Gene Tfu_1599 details

Gene Information

• Locus tag: Tfu_1599
• ID: 3581642
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 1842424
• End bp: 1843068
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637685293
• Product: CRISPR-associated Cse2 family protein
• Protein accession: YP_289657
• Protein GI: 72162000
• TIGRFAM ID: [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.0275986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCACCA CCGAAACCCC GAAAACCATC TCCTTGACAT GGGTGGGAAC ATTCGTCGAC 
CAACGGGTCC GAGAAATCCA GGAAGGCTAC CGCCTCGACA ATCCCCGCGC GGTAGCGACC 
CTGGCGCGCC TCCGCAGAGG AGCAGGCAAG GAAATCGGGG ACACCCCCGA CTTGTGGGGG 
CTCATCCTCG ACGACCGTTT CTACGCTGAC GCCCCTCCCC TCAAAGAAAA AGACATGGAA 
GTCGCGGAGA ACTCCGCGCA CATCGCCCTC ACCCTCTACG CCATCCACCA ACAGTCACGC 
CGCGACGACC GCATGCACCA ACGTGGCTGG GGACTGGGTG AGGCAGTACG CAGACTCATG 
CCTTCAAGCG AAATCGACGA ACCGCTCCGC AAACGCTTTG TGCAAGTCGG CCACGCCGTC 
ACGTATAAAG CTCTCGCTCA GAGGTTGCGC GAAATCGTCA CCCTGCTGCG CCGCGACGCC 
ATCCCCCTCG ACTACGGGCT GCTCGCTGAC CAGCTCTACC AGTTCCGCAC CCCCCAAGGA 
GCACAACGCG TCCGTACTGC CTGGGGACGC GGATTCCACG CCTACCGGCC CAAGACCACC 
CAAAACCCTG ACTCCACCAC GACGACCGAA AAGGACAACT CATGA 

 

Protein sequence

MTTTETPKTI SLTWVGTFVD QRVREIQEGY RLDNPRAVAT LARLRRGAGK EIGDTPDLWG 
LILDDRFYAD APPLKEKDME VAENSAHIAL TLYAIHQQSR RDDRMHQRGW GLGEAVRRLM 
PSSEIDEPLR KRFVQVGHAV TYKALAQRLR EIVTLLRRDA IPLDYGLLAD QLYQFRTPQG 
AQRVRTAWGR GFHAYRPKTT QNPDSTTTTE KDNS