| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1597 |
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| Symbol | |
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| ID | 3581640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1840500 |
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| End bp | 1841237 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685291 |
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| Product | CRISPR-associated Cas5e family protein |
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| Protein accession | YP_289655 |
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| Protein GI | 72161998 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0035372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGTCC TGACACTACT GTTGGCCGGC CCCTTGCAGG CGTGGGGGGC CGCCTCCCGC
TTCACGCGGC GCACCACCGA ACACGCCCCT ACCAAAAGCG GTGTCCTCGG CCTGCTCGCC
GCCGCCCAAG GCCGCGAACG CACCGACGAC CTGTCCGACC TGGCTGCCCT GCGCTTCGGC
GTACGCGTCG ACCAGCGCGG CACCCGCATC CGCGACTTCC AGACCGCTAT ACACCTCGAC
ACCGGAAAAT CCATGCCGGT GTCCGAACGT TTCTACCTGG CGGACGCTGT GTTCGTGGCA
GCAGTCGAAG GCGAAGACAC CCTCATCGAC ACCCTGCACC AGGCAGTACA GCACCCCGTG
TACCTGCCCT ACCTGGGGCG GCGCTCCTGC CCACCCTCCC GCCCGATCAA CCTGGGCGTG
CACAGCGGAA AACCGCTTGA ACAAGTGTTG GCAGAAGAAA AGTGGCATGC CGCCAACTGG
TATCAGCGCC AACTACGCGA CCTTCCGGAG GTCCCCCTCG ACCTTCTCGT CGACGCGCCC
CCGGGTGATC CTGGTGCCGA CAGCCTGCGT GACCTGCCAA TCAGCTTCGA CCCGGTGCAT
CGCCGCTACG CCCTGCGCGG CGTACGCACG TTAACAGTCA CCGTGCCTAA CCCGCAGGCA
CGCAAGACCA CACCGCCCAA CCACGACCCC ACCCCACTCC TGAGAGAACC TCATGTACCT
CACCCGCTTT CGCCTTAA
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| Protein sequence | MKVLTLLLAG PLQAWGAASR FTRRTTEHAP TKSGVLGLLA AAQGRERTDD LSDLAALRFG
VRVDQRGTRI RDFQTAIHLD TGKSMPVSER FYLADAVFVA AVEGEDTLID TLHQAVQHPV
YLPYLGRRSC PPSRPINLGV HSGKPLEQVL AEEKWHAANW YQRQLRDLPE VPLDLLVDAP
PGDPGADSLR DLPISFDPVH RRYALRGVRT LTVTVPNPQA RKTTPPNHDP TPLLREPHVP
HPLSP
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