| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1593 |
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| Symbol | |
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| ID | 3581636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1835906 |
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| End bp | 1838740 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637685288 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_289652 |
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| Protein GI | 72161995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0156673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAAC ACGATTCTAC AGATGACAAG CACGGTATCC CACCGCTCGA CTTGAGGTTC
TGGGCGAAAG AACGCGGCCT TCGCGGCAAG ACCTACCCCT TGGTGTGCCA TTCCCTCGAC
GCTGCTGCCG CGGCATTGGT GTTGTGGAAC GAATATCTCT CTCCCGGGCT GCGAGACACG
ATCGCTTCGT CTATGGAGAC TGACGAAGAG CACGCGGGAC ACTGCATCGC TTTCTGGGCG
GGGTTGCATG ACATAGGGAA ACTAACCCGA GAGTTCCAAC AGCAGATCGC TATCGACCTT
TCCGCTTATC CCGGGGAGGA GCTCAGTGGG GAACAAAGGT CCCATGCTGC CGCGACCGGT
AAATGGCTGC CGTTCGCGCT TCCTTCACTC GGCTATCCCA ACGGAGGACT AGTCACCGGC
CTCGTTGCCC AGATGCTTGG GGGCCATCAC GGTACGTTCC ACCCACACCC CTCTTTTCAA
AGCCGCAATC CGCTAGCGGA GTTCGGCTTT TCCTCGCCGC ACTGGGAGAA GCAGCGCCAC
GCCCTGCTGC ACGCAGTTTT TGATGCGACG GGGCGTCCCA CACCTCCTGA CATGCTTGAC
GGGCCTACAG CATCGGTCGT GTGCGGCCTG GTCATCCTTG CTGACTGGCT GGTCAGCCAG
GAGGATTTTC TCCTGGAACG TCTCACCTCC CTGCCCGCAG ACGGTTCCGC GTCTGCACTG
CGCGCCCACT TTGAAACGTC GCTACGGCGC ATCCCCTCAC TTCTCGACGC CGCGGGTCTA
CGGCCGATCA CAGTTCCTCC GGCCACGTTC ACTGAGTCGT TTCCGCACCT GAGCAAGCCC
AACGGCCTTC AAGCATCGTT GGCGAAACAC CTTCCTTGCC TGTGCACCGG TCCGGGATTA
GTGCTGATCA CCGCGCCCAT GGGTGAGGGC AAGACCGAAG CCGCCTACCA TGTGGCGGAT
CTGCTGGGGA AGGCAACGGG GCGCCCTGGA CGTTTTCTTG CGCTTCCCAC CATGGCCACT
GCTGACCAGA TGCACACCCG GCTCAAGGAG TACGCACGCT ACCGGGTGGA GAACACAGAC
CTTCCGCGCT CCTCCACGCT GGCCCTCCTG CATTCAATGG CGTGGCTGAA TCCCGACTAC
GCCCCCGCCG ACCTGCCAGG CGTGTCGAAA GTGCTCTCTA ATCTCGGGCA CCGCGATCCG
TTTGCCGCAA CTGACTGGCT GATGGGGCGT AAACGGGGCC TACTCGCTCC CTGGGCAGTC
GGCACAATCG ACCAAGCACT CATGGCGGTG CTGCGTGCGA AACACAACGC GCTGCGCCTG
TTCGGGCTTG CTGGGAAAGT GGTGGTTGTC GACGAGGCGC ACGCGGTCGA CCCTTACATG
CAGGTCCTCT TGGAACAGTT GCTGCGCTGG CTGGGCACGC TTGATGTGCC GGTAGTGCTG
CTGTCGGCGA CCTTGCATCA CAGCATCGCG AACTCACTTG TCAAGGCGTA CCTGGAAGGT
GCCCGAGGCA GAAGGTGGAA CAGGTCTGAA CCGCAGCCTG TTTCGGAGGT CTCCTACCCT
GGCTGGCTGC ACGTTGACGC TCGGATCGGA AAAGTGACTC GCAGCAGCGA CGTCGACCCC
TTGCCTATCG CTACGACTCC CCGCAAGCCC TTGGAGGTGC GGCTTGTGGA CGTGCCGGTC
AAGGAGGGAG CCCTAAACCG GTCCACGGTG CTCGCTAAGG AGCTGACTCC ACTAGTGAAG
CAGGGAGGAT GCGCAGCGAT CATCTGCACC ACGGTTGCTG AAGCCCAGGG AGTCTACGAT
CTGCTTTCCC AGTGGTTTGC GACGCTCGGT GAGGACGCCC CCGACCTTTA CCTGCTGCAT
TCGCGGTTCC CTAACCGGCA GCGCACGGAG ATCACCGCGA CCATCGTTGA CCTGTTCGGT
AAAGAAGGTG CACAGAGCGG ACGGAGACCC ACTCGCGGCG CTGTCCTGGT AGCCACCCAA
GTGGTGGAGC AGTCCCTCGA CTTGGACGTG GATTTGATGA TCAGCGACCT CGCTCCAGTG
TCGCTGTTGC TGCAACGGGC GGGACGCTGC TGGCGGCACG AACACCTGGG CATCATCAAC
CGTCCCCAAT GGGCCAAACA GCCCGAGCTT GTGGTACTCA CCCCGGAACA GAACGGCGAC
GCTGATAGGG CTCCGTGGTT TCCGCGTTCC TGGACATCGG TGTACCCGCT GGCATTGCTC
CAGCGCACGT ACACACTGCT GCGCCGCAGG AACGGGGCCC CGGTGCAGAT TCCTGAAGAC
GTGCAGCAGC TTGTGGACGA CGTGTATGAC GACGACTCGC TCGCTGAAGA TCTAGAAGCA
GACATGGAGC GCATGGGGGA GGAGCTGGCA CAACGCGGCT TGGCGCGCAA CGCGGTCATC
CCCGACCCAG ACGATGCGGA AGACAACCTG AACGGGCTCA CCGAGTTCAG CTTTGATGTG
GACGAGCACG TGCTCGCGAC CCGGTTCGGT GCCGGTTCAG TCCGGGTGTT GTGCTACTAC
GTGGACACGG CGGGGAACCG CTGGCTTGAC CCTGAATGCA CGGTCGAGTT TCCTGAACAG
GGCACGGGGC GAGAGGGCCG GTTCACCATG GCAGACTGCC GCGACCTGGT GGCCCGCACG
ATCCCGGTGC GTATGGGTCC CTGGGCGAGT CAACTCACCG AGGACAACCA TCCTCCTGAG
GCATGGCGGG AGTCGTTCTA CCTTCGCGAC CTGGTTCTTA TACCTCAACG TGTGACAGAC
GAGGGCGCGG TGCTCCCCAC TGAAACCGGT GGACGAGAGT GGTTGCTTGA TCCCTGTAAG
GGGCTGATCT TTTGA
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| Protein sequence | MPEHDSTDDK HGIPPLDLRF WAKERGLRGK TYPLVCHSLD AAAAALVLWN EYLSPGLRDT
IASSMETDEE HAGHCIAFWA GLHDIGKLTR EFQQQIAIDL SAYPGEELSG EQRSHAAATG
KWLPFALPSL GYPNGGLVTG LVAQMLGGHH GTFHPHPSFQ SRNPLAEFGF SSPHWEKQRH
ALLHAVFDAT GRPTPPDMLD GPTASVVCGL VILADWLVSQ EDFLLERLTS LPADGSASAL
RAHFETSLRR IPSLLDAAGL RPITVPPATF TESFPHLSKP NGLQASLAKH LPCLCTGPGL
VLITAPMGEG KTEAAYHVAD LLGKATGRPG RFLALPTMAT ADQMHTRLKE YARYRVENTD
LPRSSTLALL HSMAWLNPDY APADLPGVSK VLSNLGHRDP FAATDWLMGR KRGLLAPWAV
GTIDQALMAV LRAKHNALRL FGLAGKVVVV DEAHAVDPYM QVLLEQLLRW LGTLDVPVVL
LSATLHHSIA NSLVKAYLEG ARGRRWNRSE PQPVSEVSYP GWLHVDARIG KVTRSSDVDP
LPIATTPRKP LEVRLVDVPV KEGALNRSTV LAKELTPLVK QGGCAAIICT TVAEAQGVYD
LLSQWFATLG EDAPDLYLLH SRFPNRQRTE ITATIVDLFG KEGAQSGRRP TRGAVLVATQ
VVEQSLDLDV DLMISDLAPV SLLLQRAGRC WRHEHLGIIN RPQWAKQPEL VVLTPEQNGD
ADRAPWFPRS WTSVYPLALL QRTYTLLRRR NGAPVQIPED VQQLVDDVYD DDSLAEDLEA
DMERMGEELA QRGLARNAVI PDPDDAEDNL NGLTEFSFDV DEHVLATRFG AGSVRVLCYY
VDTAGNRWLD PECTVEFPEQ GTGREGRFTM ADCRDLVART IPVRMGPWAS QLTEDNHPPE
AWRESFYLRD LVLIPQRVTD EGAVLPTETG GREWLLDPCK GLIF
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