Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1527 |
Symbol | |
ID | 3581701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1757765 |
End bp | 1758466 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685222 |
Product | rare lipoprotein A |
Protein accession | YP_289586 |
Protein GI | 72161929 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0105659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGAAC CGTGGCGGGT GCTTGACCAG GGTGGATCAT GGCGGGTAGA CACGGGTGCG GCCCTGGACA GCGGGGGTGG GTCGGGTGCG GGGCCGGCAG ACCAGTGGTT GGTGGAACGC AAGGGGCAAT GCGTGACAGG TCGATTCGTG GGGTTGAAGC CTGCCGTGGG GGTGGCTGCG GCGGCCGGGG TTGTGGCGGC TGTGGGTGTT GGGGTGGTTG TGGCGGTTCA CGGAGACGAG GGTGGGGGGT CGGCGGATGT GGGGGTGGTA AGCCCGCTGC CGCGGCATGC CCCCGCGGCC GGGGTGGAGG CGGGTGGGGA GGCGGCCCGC GCCAGGCAGC AGCGGGCGGT GGCTGAAGGG GTGCGGAGTC GCACGGTGGA GGTGGCGGCA TCCCGCCTTC CCGAACACCC CGATGCGGGG CAATCTGGAC AGTGTTTGGC CTCAATGTAT GGGGATCCGC AGCCGACCGC GTCCGGGGAG ATCTTCGATC CCACACAGTT GACCGCGGCA CACCCCACTT TGCCGTTTCA CACCATGGTG GAAGTCACCA ACACGGCTAC CGGGCGGAGC GTGACCGTGC GGATCAACGA CCGGGGCCCT TATGTGGCGG GGCGGTGTCT GGATTTGAGC ACTGCAGCGT TTTCCGCGAT CGCTTCCCTC GACCAGGGGG TGGTCCGCGT GTCGTGGCGG GTCGTGGGCT GA
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Protein sequence | MAEPWRVLDQ GGSWRVDTGA ALDSGGGSGA GPADQWLVER KGQCVTGRFV GLKPAVGVAA AAGVVAAVGV GVVVAVHGDE GGGSADVGVV SPLPRHAPAA GVEAGGEAAR ARQQRAVAEG VRSRTVEVAA SRLPEHPDAG QSGQCLASMY GDPQPTASGE IFDPTQLTAA HPTLPFHTMV EVTNTATGRS VTVRINDRGP YVAGRCLDLS TAAFSAIASL DQGVVRVSWR VVG
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