| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1507 |
|---|
| Symbol | |
|---|
| ID | 3580234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1739217 |
|---|
| End bp | 1739999 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637685202 |
|---|
| Product | methylated-DNA-(protein)-cysteine S-methyltransferase |
|---|
| Protein accession | YP_289566 |
|---|
| Protein GI | 72161909 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase |
|---|
| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000129877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAG AACCATTGGA ACAGCAGCTC GCAGACCTGG CCGTCGACGC CCCCGCCGAC
TTGATCGACC GGATCGTGGC CCGCTGGGTC ACCGTGGAGA GCCCGATCGG GGAGCTTTTC
GTCGCCTACA CCGACCACGG CATCGCCTAT GTCCGGCGGC ACGGAGCCGA AGCAGCCGAA
GAGTTCCGCC GCCGCTTCCA GCGGCCGCTG GTGCGCGCCC CCCGGCCCCC GGCTGGACTG
GTGTCGGCGC TGCGGCGCGG ACGCAGCAGC ACGCTCACTT TTGACTTGCG GGGCCTGTCC
GACTTCCAGG TTGCGGTGCT GCGCGCCACT CGGACCATCC CGCGGGGTGA AGTGCGCCCC
TATGCCTGGA TCGCCCAGAA GATCAACCGG CCTAGAGCAG TGCGCGCGGT GGGCACGGCG
CTGGCCACCA ATCCGGTCCC CGTGCTGATC CCCTGCCACC GTGTGGTCCG CTCCGACGGT
TCCCCCGGCG AGTACATTTT CGGGGCTGAA GTCAAGCACC GCCTGCTGCA CGACGAGGGC
ACCAATCTCG AGGAGCTGCA TACGCTGGCC CGGCGCGGCA TCTTCTACGT GGCTAGTGAC
ACCACCGGAA TCGTGTGCCA TCCGACGTGC CGCCACGCCC GCCGAATCAC CCCGCCCCAC
CGGAAAGGGT TCCGTACCTT CGCCGAGGCC GCTGCCGCGG GATACCGCCC TTGCCAGCAC
TGCCAGCCCG CTCCCACGGT AGCGACGCCA GCCCCAGGGC TGTCCCGCGA CGAAGAGCGG
TGA
|
|---|
| Protein sequence | MREEPLEQQL ADLAVDAPAD LIDRIVARWV TVESPIGELF VAYTDHGIAY VRRHGAEAAE
EFRRRFQRPL VRAPRPPAGL VSALRRGRSS TLTFDLRGLS DFQVAVLRAT RTIPRGEVRP
YAWIAQKINR PRAVRAVGTA LATNPVPVLI PCHRVVRSDG SPGEYIFGAE VKHRLLHDEG
TNLEELHTLA RRGIFYVASD TTGIVCHPTC RHARRITPPH RKGFRTFAEA AAAGYRPCQH
CQPAPTVATP APGLSRDEER
|
|---|
| |