Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1482 |
Symbol | |
ID | 3579494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1712690 |
End bp | 1713286 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685177 |
Product | hypothetical protein |
Protein accession | YP_289541 |
Protein GI | 72161884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000942225 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG GCATGCAGAC CGAGGACTGG AAAGCCGAAT GGCAGCCCGT CGTCGACGCC GTGGGCCGCG ACTTTTCCGA CGGGGAGACA GTTTTCGGGG CTGACCCGGT CGAGCGCGGG GCGATCCGCC GCTACCTCGA ACCGCTCGAG TTCGACTGCG CGCTCCACAC GGACCCCGCC GTGGCCCGCG CCGCCGGGTT CGCTGACGTC ACCATGCCCT ACACGGGTGT GCTCACCTGG ACGATCCCGC CGCTGTGGCA GCCAGGCGAA GTGCTGTTCG ACAGCGACGA CCGCAATGCG CAACCGGTGC GCAGCCCCAT CAACAACCAG GACATGCCCC TGGGGCCGAA AACCACCGGT TTCTTCGGCA CCGACATCGA CATCGACTTC ATCCGTCCGG TGGTGGCCGG GGAACGCATC GGCCGCCGCG GCCGCCGCCT GGTGTCGTGC GTGCCCAAGG AGACGTCAGT GGGCCGTGGC GCCTTCCTCA CCTGGGAGAG CGACGTGGTG ACCGAAACCG GTGAGGTCGT CGCACGGATC CGGATCGGCA CCTACGCCTA CGTGCCCAAG AACAAGACCG AGGCCAGTGA TGACTAA
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Protein sequence | MSGGMQTEDW KAEWQPVVDA VGRDFSDGET VFGADPVERG AIRRYLEPLE FDCALHTDPA VARAAGFADV TMPYTGVLTW TIPPLWQPGE VLFDSDDRNA QPVRSPINNQ DMPLGPKTTG FFGTDIDIDF IRPVVAGERI GRRGRRLVSC VPKETSVGRG AFLTWESDVV TETGEVVARI RIGTYAYVPK NKTEASDD
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