| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1440 |
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| Symbol | |
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| ID | 3580283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1666098 |
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| End bp | 1667786 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685137 |
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| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_289501 |
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| Protein GI | 72161844 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.706802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGAGA AGACCATTAC AGAACAGTTT AGTTTCGCCG ACCTTGGCCT CCGGCCGGAA
CTGCTCGATG CCCTCGCCGA GGTCGGCTAC GAGGAGCCCA CGGCCATCCA ACGCGAGGCG
ATCCCCTCGC TGTTGGAAGG CCGTGACCTG CTCGGCCAGG CCGCAACCGG TACGGGGAAG
ACCGCAGCCT TCTCCCTGCC GATCCTGCAC CGGCTGCCGG ACAGCGACCG CGGGGACACT
CCCTCGGCGC TCATCCTGGT GCCCACCCGG GAACTGGCCT TGCAAGTATC GGAAGCACTC
CACCGCTACG GCCGCCACCT GAAGGCACGC ATCCTCCCCA TCTACGGCGG CCAGCCCATC
GGCCGCCAGT TGCGGGCCCT GGAACGCGGT GTCGACGTCG TCGTCGCCAC CCCGGGACGG
GCCCTCGACC ACATCGGCCG CGGCACCCTC GTCCTGGACA CGGTGCGCAC GGTCGTCTTG
GACGAAGCCG ACGAGATGCT CGACATGGGC TTCGCCGAAG ACATCGAGGC GATCATCGAA
GAAGTGCCGG AGAACCGCCA GACAGTGCTG TTCTCGGCAA CCATGCCCGA CCGCATCGAA
GGCATCGCCC GACGCCACCT CACCGACCCG GTGCGCGTAC GCATCGCCCG CACTTCTCCC
GCACCCGGAG AAGAGCCGAA AGTCCGGCAG AACGCCTACA TCGTGGCCCG CCCCTACAAA
CCCGCGGCCC TGGGACGCGT CCTCGACATG GAATCCCCCA CCGCGGCCCT CGTGTTCTGC
CGCACCCGTG AGGAAGTCGA CCAGCTCACC GAGACGCTCA ACGCTCGGGG ATACCGCGCT
GAAGCGCTCC ACGGCGGCAT GAGCCAGGAA CAGCGCGACC GGGTCATGGC GCGCCTCCGC
GGAGGAACCG CCGACCTCCT CATCGCCACG GACGTCGCCG CCCGCGGACT CGACATCGAA
CACCTCACCC ACGTGGTCAA CTACAATGTG CCGTCGGCAA CCGAAACCTA CGTGCACCGC
ATCGGCCGCG TGGGGCGGGC CGGCCGAGAA GGCGTCGCGA TCACCCTCGT CGAGCCGCGG
GAACACCGGA TGCTCAAAAC CATTCAGCGC AGCACGAGCG GCCCGATCAG CGTCGAGAAG
CTCCCCACCG TCGCGGACCT GCGGGCCCGC CGCGTCGAAC TGACCCGTGC TGCGCTCCAC
GAAGCTCTGA AGGAGGAGGA CGACGACCGC GAGGCGTTCC GCGTGGTCGT GGAGTCGCTC
GCCGAAGAGT TCGACATCAT GGAGATCGCG CTGGCCGCGG TGAAACTGGC GCATGAAGCC
AGCGGCGCCG TCACCGAAGA GGAGGAGATC CCCGAACCGG TGCTCCGCCC CGAGCGGAGC
GAACGCCGCG AACGCCGTGG ACGGCGCGGC GGACCGGGCC GCGGTGAACG GCGCGGCCGA
GGCCCCTCCG ACGGCATGAC CCGCCTCTTC GTCGGCATTG GACGCAACGC CCGGGTCCGC
CCCCAAGACC TTGTGGGAGC GATCGCCGGG GAGACCGCAT TGAGCGGACG GGACATCGGC
GCGATCGAAA TCGCCGACCG CTTCTCCCTG GTGGAAGTGC CCGAATCCAC TGCCGACGGT
GTGATCGCGG CACTGAAGAA AAGCACGATT AAAGGACGCC GCACCGTCGT ACGCCGCGAA
CGCTTCTAA
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| Protein sequence | MTEKTITEQF SFADLGLRPE LLDALAEVGY EEPTAIQREA IPSLLEGRDL LGQAATGTGK
TAAFSLPILH RLPDSDRGDT PSALILVPTR ELALQVSEAL HRYGRHLKAR ILPIYGGQPI
GRQLRALERG VDVVVATPGR ALDHIGRGTL VLDTVRTVVL DEADEMLDMG FAEDIEAIIE
EVPENRQTVL FSATMPDRIE GIARRHLTDP VRVRIARTSP APGEEPKVRQ NAYIVARPYK
PAALGRVLDM ESPTAALVFC RTREEVDQLT ETLNARGYRA EALHGGMSQE QRDRVMARLR
GGTADLLIAT DVAARGLDIE HLTHVVNYNV PSATETYVHR IGRVGRAGRE GVAITLVEPR
EHRMLKTIQR STSGPISVEK LPTVADLRAR RVELTRAALH EALKEEDDDR EAFRVVVESL
AEEFDIMEIA LAAVKLAHEA SGAVTEEEEI PEPVLRPERS ERRERRGRRG GPGRGERRGR
GPSDGMTRLF VGIGRNARVR PQDLVGAIAG ETALSGRDIG AIEIADRFSL VEVPESTADG
VIAALKKSTI KGRRTVVRRE RF
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