| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1423 |
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| Symbol | |
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| ID | 3580974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1647983 |
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| End bp | 1649002 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637685120 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_289484 |
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| Protein GI | 72161827 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.174338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA CACGGCTGAG ACTGCTGGTA GAACTGCGGC GGCTGGGGAC GATGACGGCG
GTCTCCGAGG TCACGGGCAT GGGCACCTCG GCGGTGTCCA AGCATTTGGC CGTATTGGAG
CGGGAAGCAG GGGTGCGCCT CCTCGTTCCG GACGGCCGTC GGGTCCGGTT GACCCCCGCG
GGGCGCCGGC TCGCCGAGCA TGCGCGGGAC ATCCTGGAGC GCGTCGAGGC GGCGCGAGCC
GAAATGGCAG GTGAAGGGCC GCCGGTGGGC CGCATCAACC TGGTGACGTT CGTCAGCATG
ACGGTCCCCG TGATCCTGCC CGCCATGGAG CAGTTGCGCC AGCAGCACCC GGGACTCGAG
GTGCGCCTGA TCGAGCACGA ACCGGACCAG GCGTTGGACC TCCTGCTGAG CGGGGAGGCC
GACCTTGGGC TGATCTACGA GTACACGCTG GTCCCCCGCC GCATTCCGGA AGGGCTCACC
GTGCACCCGG TGGGGCGGGA ACCCTTGTTC CTCGCCGAGC CGACGGCGAG CAACCCGAGC
GGGGCGACCA TGACGCGGGA GCGGCTGCGT GCCTTGGCCG ACGCGTCGTG GATCGCCAAC
TCGCGCGGAA GCGACGACGA CGAGCTTGTG CTCCGGATGT GCGCGGACGC GGGCTTCCGA
CCGCAGATCC GGCATCGCAT CGACACGTTG GAGGCGCTCA GCGCGGTGGT GGCCGCTGGA
TGGGGGGTGG GGCTCCTGCC GAAGCTGGCT GCGTCCCCGC CCCACCCCGG GGTGGTGCAT
ACCCCGCTGG GCGAGCTGGC GGGAGAGCGC CGCATCTCCC TGGTGGCCCG TACCGGGGCG
TGGGCGTGGC GGCCGCTGCA CGTCGTCGCC CACGCGATCC ACCGGGCTGC CCGCCACGTG
CTGGACCCGG TGGCGAGTGG GTTTTCCGAG GGGGCGGCTG CGGACGGGTC AGGCGCTGAG
GACGAACCGG CCCGCGGGGA CAGTGATCCG GTGCGCGGCT TCCCGCATCG CGGTGAGTAG
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| Protein sequence | MDLTRLRLLV ELRRLGTMTA VSEVTGMGTS AVSKHLAVLE REAGVRLLVP DGRRVRLTPA
GRRLAEHARD ILERVEAARA EMAGEGPPVG RINLVTFVSM TVPVILPAME QLRQQHPGLE
VRLIEHEPDQ ALDLLLSGEA DLGLIYEYTL VPRRIPEGLT VHPVGREPLF LAEPTASNPS
GATMTRERLR ALADASWIAN SRGSDDDELV LRMCADAGFR PQIRHRIDTL EALSAVVAAG
WGVGLLPKLA ASPPHPGVVH TPLGELAGER RISLVARTGA WAWRPLHVVA HAIHRAARHV
LDPVASGFSE GAAADGSGAE DEPARGDSDP VRGFPHRGE
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