| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1406 |
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| Symbol | |
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| ID | 3580957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1628865 |
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| End bp | 1629239 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685103 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_289467 |
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| Protein GI | 72161810 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.024195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGACGG ACTTTGTGCG TATCGACCCG AATTCCAAAG TTCCGCCGTA CGAGCAGATC
CGCGCGGCCG TCGCCAACGC CGCTGCGAGC GGACGGCTGC CGGTCGGCTA CAAACTGCCT
ACGGTGCGTG CCCTAGCCAG CGAACTGTCG GTGGCAGTGA ACACGGCGGC GCGCGCCTAC
CGGGAGCTGG AACAGGCAGG CGTCGTGGAA ACCCGGGGCA GGTCGGGCAC GTTCATTGCG
GCCGGCGGCG ACCGGCAGCG CGCCGAAGCG CTGGCGGCGG CACGCCGCTA CGCCGAAACA
GTGTCCCGGT TGGGGATCTC CCAGCAGGAG GCTGTGGACA TCGTGCGGGC GGCAGTAGAG
AACCTCACCC GCTGA
|
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| Protein sequence | MATDFVRIDP NSKVPPYEQI RAAVANAAAS GRLPVGYKLP TVRALASELS VAVNTAARAY
RELEQAGVVE TRGRSGTFIA AGGDRQRAEA LAAARRYAET VSRLGISQQE AVDIVRAAVE
NLTR
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