Gene Tfu_1400 details

Gene Information

• Locus tag: Tfu_1400
• ID: 3581027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 1624280
• End bp: 1624975
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637685097
• Product: endonuclease V
• Protein accession: YP_289461
• Protein GI: 72161804
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1515] Deoxyinosine 3'endonuclease (endonuclease V)

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCACA TCACCCCGGA GTTGGCGGCC ATGGAACTGT GGCCTACCGA CCCTGATGCG 
GCACGTGCCC TCCAAAGCCG GTTGGCGTCC CGGGTACGTG TCCACCCCTG CGACCCGGAT 
GCGGTGCGCC TGGTCGCAGG CCTGGATGTG AGCTACGGTC CGACCGAGCT GGTGGCGGCC 
GCGGTCGTCG TGGACGCCGC CACGTTGGAG GTCACCGCCC AGGCCACGGT GCGCGCAACG 
CCGACGTTCC CGTATGTGCC GGGCCTGTTC GCGTTCCGGG AACTGCCGCC GCTGCTCGCC 
GCACTGGAAC AGTTGCCTGT CGAACCGGAC GTGTACCTCT GCGACGGTTA CGGGCTGGCG 
CATCCGCGCC GGTTCGGGCT GGCCTGCCAT CTGGGGGTTT TGGTGGACCG GCCGGTGTTC 
GGGGTGGCGA AGACCGCGTT TGTGGGTGAC GCCGCCGAAC CCGGCCCGCG GCGGGGCTCA 
GCCACCGACC TGGTGGACCG CGGTGAAGTG GTGGGCCGCT GCCTGCGGGT CCACGACGGG 
GTCAAACCGG TGTACGTGTC GGTGGGGCAC CGGGTGGACT TGGATTCCGC GTGCGAGCTG 
GTGCTACGGC TGTCGCCGCG CTACCGGATC TGTGAGCCGA TCCGCCGCGC CGACCAGTTG 
TCGCGCCGGG AACTGGCCGC ATCCGGCCGC GCGTGA 

 

Protein sequence

MPHITPELAA MELWPTDPDA ARALQSRLAS RVRVHPCDPD AVRLVAGLDV SYGPTELVAA 
AVVVDAATLE VTAQATVRAT PTFPYVPGLF AFRELPPLLA ALEQLPVEPD VYLCDGYGLA 
HPRRFGLACH LGVLVDRPVF GVAKTAFVGD AAEPGPRRGS ATDLVDRGEV VGRCLRVHDG 
VKPVYVSVGH RVDLDSACEL VLRLSPRYRI CEPIRRADQL SRRELAASGR A