| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1377 |
|---|
| Symbol | |
|---|
| ID | 3581956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1595676 |
|---|
| End bp | 1596965 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637685074 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_289438 |
|---|
| Protein GI | 72161781 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.228552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA CCGGTCGTCA GCAGGAAGCC AGCGCGGCTC TCCAAAAGGA GTGGGAGACC
AACCCGCGCT GGAAGGGCGT CAAGCGGACG TACTCCGCTG AGGATGTGAT CCGGCTGCGC
GGCTCGGTCA CCGAGGAGCA CACGCTGGCC CGTTTGGGAG CAGAACGCCT GTGGGAGCTG
CTCCACACTG AGGACTACAT CAACGCCCTC GGTGCGCTCA CCGGTAACCA GGCTGTCCAG
CAGGTCCGCG CCGGCCTGAA GGCCATCTAC CTCTCCGGAT GGCAGGTCGC AGCCGACGCC
AACCTGTCCG GGCACACCTA CCCCGACCAG AGCCTCTACC CGGCCAACTC GGTTCCGCAG
GTGGTGCGGC GGATCAACAA CGCGCTGCTG CGCGCAGACC AGATCTCCTG GTCGGAGGGT
GACGAGGACG CCCCGTACTG GCTGGCGCCG ATCGTCGCCG ACGCGGAGGC CGGATTCGGC
GGTGTCCTCA ACGCCTACGA GCTGATGAAG GCCATGATCG CCGCGGGTGC GGCTGGCGTG
CACTGGGAAG ACCAGCTCGC CTCCGAGAAG AAGTGCGGCC ACCTGGGCGG CAAGGTCCTC
ATCCCGACCG GCCAGCACAT CAAGACCCTC AACGCGGCGC GGCTGGCTGC CGACGTGGCC
GGGGTGCCTT CGCTGATCAT TGCGCGGACC GACGCGCAGG CTGCCACCCT GATCACGAGC
GACATCGACG AGCGCGACCG GCCTTTCATC ACCGGCGAAC GCACTCCGGA GGGCTTCTAC
CGGGTCCGCA ACGGCCTGGA AGCGTGCATC GCCCGCGGCC TGGCGTACGC TCCCTACGCC
GACCTGCTGT GGATGGAGAC CTCCACGCCG GACCTGGAGG TGGCTCGCCA GTTCGCCGAA
GCGATCAAGG ACAAGTACCC CGACCAGTTG CTGGCCTACA ACTGCTCGCC GTCGTTCAAC
TGGAAGCGTC ACCTCGACGA CGCGACCATC GCCAAGTTCC AGCGCGAGCT GGGCCACATG
GGCTACAAGT TCCAGTTCAT CACCCTGGCG GGCTTCCACT CGCTCAACTA CTCGATGTTC
AACCTGGCCA AGGGGTACGC GGCTCGGGGC ATGAGCGCCT ACGTGGAGCT GCAGGAGGCG
GAGTTCGCTG CCGAGGCCGA CGGCTACACC GCGACCCGGC ACCAGCGCGA GGTCGGCACC
GGCTACTTCG ACCTGATCAG CACCACGATC TCGCCGGACG CTTCCACGAC GGCTCTGACC
GGATCCACCG AAGAGGAGCA GTTCAACTAA
|
|---|
| Protein sequence | MSITGRQQEA SAALQKEWET NPRWKGVKRT YSAEDVIRLR GSVTEEHTLA RLGAERLWEL
LHTEDYINAL GALTGNQAVQ QVRAGLKAIY LSGWQVAADA NLSGHTYPDQ SLYPANSVPQ
VVRRINNALL RADQISWSEG DEDAPYWLAP IVADAEAGFG GVLNAYELMK AMIAAGAAGV
HWEDQLASEK KCGHLGGKVL IPTGQHIKTL NAARLAADVA GVPSLIIART DAQAATLITS
DIDERDRPFI TGERTPEGFY RVRNGLEACI ARGLAYAPYA DLLWMETSTP DLEVARQFAE
AIKDKYPDQL LAYNCSPSFN WKRHLDDATI AKFQRELGHM GYKFQFITLA GFHSLNYSMF
NLAKGYAARG MSAYVELQEA EFAAEADGYT ATRHQREVGT GYFDLISTTI SPDASTTALT
GSTEEEQFN
|
|---|
| |