Gene Tfu_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1374 
Symbol 
ID3581953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1592216 
End bp1592911 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID637685071 
ProductGntR family transcriptional regulator 
Protein accessionYP_289435 
Protein GI72161778 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0659803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCTCG CCTCAACACG TCGCACTGGA CTTGTTGACC AGGTCATTAC CCAGTTGAAA 
GCTCAGATCG ACTCGGGCGA GTGGTCAATC GGCGACCGCA TCCCTACCGA GGCCGAACTG 
TCGGATCAGC TGGAGGTCGG TCGTAACACG GTACGTGAAG CGGTGCGGGC GCTGGCCCAC 
ACCGGCCTGT TGGAGATCCG CCAAGGGGCG GGCACTTTTG TTCGCTCGTC GAGCGAACTG 
GGTGGCGCCC TGCGGCGCCG GTTGAAGCGT TCCGAGTTGC GGGAGAACTT CGAGGTGCGT 
TGGGCCTTGG AGTTGGAGGC GGCCCGGCTG GCGGCAGTCC GCCACACCGA GGAGGACCTC 
GACACGATTG ACCGTGCGCT CGGCGAACGG ACGTCCGCCT GGCACGCCCG TGACATGCAG 
GCGTTTGTGG AAGCGGATTT CGCGTTCCAC AAGGCGGTGG TGGCGGCGAC CCACAACTCG 
CTGCTCATCG AGCTGTACGA CGACATCGCC CAGGCGGTCT ACGACAGCAT CGCGCACATG 
GTGTACGAGG AGACTCCGGA AACGGCCACG GAGGAGCCGG CCTCAGACCA CCAGCGGCTG 
GCCGAGGCTA TCCGGGCGGG TGACACGGAG CGTGCGCTCC GCGAGGCCGC CTGCTACCTG 
GATGACTTGG TCAACCAGGC TGCTGCGTCG TCGTAG
 
Protein sequence
MPLASTRRTG LVDQVITQLK AQIDSGEWSI GDRIPTEAEL SDQLEVGRNT VREAVRALAH 
TGLLEIRQGA GTFVRSSSEL GGALRRRLKR SELRENFEVR WALELEAARL AAVRHTEEDL 
DTIDRALGER TSAWHARDMQ AFVEADFAFH KAVVAATHNS LLIELYDDIA QAVYDSIAHM 
VYEETPETAT EEPASDHQRL AEAIRAGDTE RALREAACYL DDLVNQAAAS S