Gene Tfu_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1346 
Symbol 
ID3579318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1561414 
End bp1562088 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID637685043 
Producthypothetical protein 
Protein accessionYP_289407 
Protein GI72161750 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGAC CGATAACCCC CGGTGAGTCC CCCGCTTTTT GGCGGTCGCT AGTCCACCGG 
ACCCTCATCA CTCCCCTGCT GCCGCAGCCG AGGCTGCGGC GCCTCGTCCA ACTGTGTGTC 
GGCTTGTACC TGTTCGGGCT CGGCCTGGCC GCCCAGGTGG CGTCCGGGCT GGGTGCCGCC 
CCGTGGGATG TGCTGCACCA AGGCCTGCAC CTGCGGACCG GCTGGTCGAT CGGCACGTGG 
GTGATCATCA CCGGCGTCAT CGTGATCCTG CTGTGGATTC CGCTGCGGCA GCGCGCCGGG 
TTGGGCACTC TGCTCAACGC GACGGGGATC GGGGTGGCGT TGGACGTCTC GCTGCTGTGG 
CTACCTGCCC CGGACGGGCT CGTGGGGCAG GTTGTGCTGC TCGTCGTGGG GATTGTGGCT 
GTGGCGGCGG GCGGCGGCAT GTACATCGGT GCCGGGCTCG GCCCGGGGCC GCGGGATGGT 
CTGATGACCG GGCTGGCGGA GCGCGGCATG TCGATCTCGG TGGCCCGCAC CTTGATCGAG 
GTGTCGGTGG TGGCGGCCGG GTTCGTCCTG GGCGGCACGG TGGGGGTGGG CACCCTGGTG 
TTCGCGCTGG CAATCGGGCC ACTCACGCAA CTCTTCTTGC CGCCATTCCA CGTGGATCGG 
CGTGTGGCGG GATAG
 
Protein sequence
MTRPITPGES PAFWRSLVHR TLITPLLPQP RLRRLVQLCV GLYLFGLGLA AQVASGLGAA 
PWDVLHQGLH LRTGWSIGTW VIITGVIVIL LWIPLRQRAG LGTLLNATGI GVALDVSLLW 
LPAPDGLVGQ VVLLVVGIVA VAAGGGMYIG AGLGPGPRDG LMTGLAERGM SISVARTLIE 
VSVVAAGFVL GGTVGVGTLV FALAIGPLTQ LFLPPFHVDR RVAG