Gene Tfu_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1300 
Symbol 
ID3580299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1506971 
End bp1508614 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content68% 
IMG OID637684997 
ProductDitJ-like CoA ligase 
Protein accessionYP_289361 
Protein GI72161704 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCT ATAAGGATCT CCGTCCTGCC TTCCCGAACC GTGAGGACTG GGCCCTGCCC 
ACGGTGCTGC GCCACCGCGC CGCCCAGGCC CCCGACGCGA TCTACCTCGA CACTCCGGAA
GAGGGCCGGC GCTGGACGTA CGCTGAGACG CTCGCCACCG CCGAAAAGGT CGGCCGTTCA
CTGCTCGCGC ACGGCGAGCC GGGAGACCGG GTGCTCATCA TGGCCCGCAA CTCCTCGGCG
TTCATCTTCA CCTGGCTCGG CAGCGCCATG GCGGGCATGG TCGAAGCCCC CATCAACACC
GCCTACAAGG GCGACTTCCT CACCCACCAG GTGCGTGTCG CACGTCCCCG CTGGGCCGTG
ATCGACGCCG AGCTCGCCGA CCGCTTCACC GACGTCGCCG ACGAGATCGA GGACATCGAA
CGCTTCTGGG TGATCGACAA CGGCGACGTC GACCAGGCGA TCGACAAGCT GCGCAAGGCC
GGATGGCAGG CGGAACGGTG GGAGGACCTG ACCGTCGACC GTGACGGAGA ACTGCCCGAG
GTCTCCCCGC GCTCCCTGGC CTCCATCTTC TTCACCTCCG GCACCACCGG GCCGTCCAAG
GGCGTGGCGA TGCCGCACGC GCAGATGTTC TTCTTCGCCG CGGAGACCGC CTGCCTGACC
CGGCTCACCG ACAAGGACGC GGCCATGGCG GTCACCCCGC TGTTCCACGG CAACGCCCAG
TTCATGTCGG CCTACCCCGC ACTGATCAGC GGCGCCCGCT TCGTGCTGCG CAGCCGGTTC
AGCGCCAGCC GGTGGATCGA TCAGATCCGG GAGTCGCAGG TCACGGTCAC CAACTTCATC
GGCGTGATGA TGGACTTCGT CTACAAGCAG CCGCGCCGAC CCGATGACGC CGACAACCCG
CTGCGCTGCA TCTTCGCGGC TCCCACGGCT TCCTCCATCC TCGAAGACTT CAAGAAGCGC
TTCGGTATCG AGGCGTTCGT CGAGGTCTTC GGCCTGACCG AGACGTCCGC GCCGATCCTG
TCGCCCTACG GGGAGGACCG GCCTGCGGGT GCGGCCGGAC TCGTGGCCGA CGACTGGTTC
GACGTGCGCC TGGTCGACCC GGAGACCGAC GAGGAAGTCC CTGTCGGCGA GGTCGGCGAA
CTGGTGGTGC GGCCCAAGGT CCCGTGGATC ACCAGCCTGG GCTACTACGG CATGCCGGAG
AAGACCGCCG AGGCCTGGCG CAACCTGTGG TTCCACACCG GGGACGCGCT GCGCCGCGAC
GAAGAGGGCT GGTTCTACTT CGTCGACCGC TACAAGGACG CGCTGCGCCG CCGCGGCGAG
AACATCAGCT CTTATGAGGT GGAGCAGGCG ATCCTCGGCT ACAAGTCGGT CGTGGAGTGC
GCGGTCGTCG CCGTGCCCGC CGACGTGGAC GCGGGCGAGG ACGAAGTGAT GGCGTGCGTC
GTGGTGCGCG AGCCCACCAC CCCCGAGGAG CTGTGGGAGT GGTGCGACTC CCGTCTGCCC
GCCTTCGCTG TCCCGCGCTA CCTGCGCTTC GTGGAGGCGC TGCCCAAGAC GCCCTCGGAG
AAGGTGCAGA AGGCGGTGCT GCGGGAGCAG GGGGTCACCA CGGACACCCA CGACCGGGAG
AAGTACCGGC AGCAGCAGAA GTAA
 
Protein sequence
MRTYKDLRPA FPNREDWALP TVLRHRAAQA PDAIYLDTPE EGRRWTYAET LATAEKVGRS 
LLAHGEPGDR VLIMARNSSA FIFTWLGSAM AGMVEAPINT AYKGDFLTHQ VRVARPRWAV
IDAELADRFT DVADEIEDIE RFWVIDNGDV DQAIDKLRKA GWQAERWEDL TVDRDGELPE
VSPRSLASIF FTSGTTGPSK GVAMPHAQMF FFAAETACLT RLTDKDAAMA VTPLFHGNAQ
FMSAYPALIS GARFVLRSRF SASRWIDQIR ESQVTVTNFI GVMMDFVYKQ PRRPDDADNP
LRCIFAAPTA SSILEDFKKR FGIEAFVEVF GLTETSAPIL SPYGEDRPAG AAGLVADDWF
DVRLVDPETD EEVPVGEVGE LVVRPKVPWI TSLGYYGMPE KTAEAWRNLW FHTGDALRRD
EEGWFYFVDR YKDALRRRGE NISSYEVEQA ILGYKSVVEC AVVAVPADVD AGEDEVMACV
VVREPTTPEE LWEWCDSRLP AFAVPRYLRF VEALPKTPSE KVQKAVLREQ GVTTDTHDRE
KYRQQQK