| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1261 |
|---|
| Symbol | |
|---|
| ID | 3580507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1465256 |
|---|
| End bp | 1465570 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637684958 |
|---|
| Product | small multidrug resistance efflux protein |
|---|
| Protein accession | YP_289322 |
|---|
| Protein GI | 72161665 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.943877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGC TGCTCCTTAT CTTGTCCGGA CTCCTCGAAA CCGTATGGGC GATCGCGCTC
GACGCCTCAC GCGGCTTCAC CCGGCTCTGG CCCTCGGTGA TCTTCCTCGT CGCCATGGTG
CTCAGCATGG TTGGCCTGTC CCTGGCCCTC AAATCCATCC CCGTCGGCAC CGGCTACGCG
GTATGGGTCG GTATCGGCGC GGTCGGCACC GCCACCGTCG GCATGGTCTG GCTCGGCGAA
GCCGTGAGCG TGGCGAAAAT CTGCTGCCTC CTGCTCATCA TCAGCGGCAT CGTCGGGCTT
CGAGTACTGG AATAA
|
|---|
| Protein sequence | MAWLLLILSG LLETVWAIAL DASRGFTRLW PSVIFLVAMV LSMVGLSLAL KSIPVGTGYA
VWVGIGAVGT ATVGMVWLGE AVSVAKICCL LLIISGIVGL RVLE
|
|---|
| |