| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1206 |
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| Symbol | |
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| ID | 3580149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1407441 |
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| End bp | 1408568 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684902 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_289267 |
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| Protein GI | 72161610 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAGC CACACGATGA CAGCATCCGC CGCCGTGGCG GCGGCCGACC GCGCGGTGGG
CGCGGCCATT TCGAACAGAC GGGACGCCGC GAGCACCGGG ACCGCCGCGG CGCACATTTC
GACCAGGACA CCGGGGACGA CCGGAGGACT GCCCCCGGCC GGAAGCAGCG GGACGGACAG
CGTGGGGAGC GCACGCAGCG TGCCCAAGCC GAACGGAGGC AGCGGCACGC TCACGACCCC
CGCGCCCGGC GCTCCGGCCG CGGGGGACGC GGCGCAGAAC GGGGACTGTC GCCGCAAGCC
CGCGCCCGGC TGCGGATCCT CCGCGACGAA TACGATCCGT GGGACGACGA TCCCGTCGAC
CCGGACGAGG AGCGCGACAC CTACGTGGAC GTTCCCGGCG GCATCCGGCT GCAGAAAGCC
CTCGCCCAGG CGGGGGTGGC GAGCCGCCGC GCCTGCGAGG AGCTGATCGC TGCAGGCCGG
GTCAGCGTCG ACGGGCAGAT CGTGCGGCGT TTCGGTGCCC GCGTCGACCC GGAGAAGTCC
GAGATCCGCG TGGACGGTAT GCGGGTAGTC ACCTCCCAGA ACCTGCGCTA CTACGCGTTG
AACAAGCCGC GCGGGGTGGT CAGCACCATG TTCGACCCCG AGGGGCGGCC CACGATCGGC
GACTACGCCG CCCAGATCGG CCCCATCGAA GAACGGCTGT TCCACGTCGG CCGCCTCGAC
ACGGACACCG AGGGCCTGAT CCTGCTCACC AACGATGGGG AGCTCGCCAA CCGGCTCACC
CACCCCCGCT ATAAAGTGAC CAAGACCTAT CTTGCGAAAG TGCCCGGACC CGTCCCCCGC
GACGTCATCC GCCAGATCCG CAAAGGGGTC GAACTGGACG ACGGATTCGT CAAAGTGGAC
TCGTTCCGGG TGATCGACAA CATCGAGCCG AAAGCCCTGG TCGAGATCAG ACTGCATGAG
GGGCGGAAGC ACATTGTGCG CCGCCTCATG AAAGCGGTGG GTCACCCCGT GTCTGACCTG
GCCCGCACCC AGATCGGACC GGTCGGGCTC AACAACCTGA AGAGCGGCAC CATCAGGGCC
CTGACCTCGC AGGAAGTCAG CGAGCTCTAC ACTGCCGCAG GGATGTAG
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| Protein sequence | MNKPHDDSIR RRGGGRPRGG RGHFEQTGRR EHRDRRGAHF DQDTGDDRRT APGRKQRDGQ
RGERTQRAQA ERRQRHAHDP RARRSGRGGR GAERGLSPQA RARLRILRDE YDPWDDDPVD
PDEERDTYVD VPGGIRLQKA LAQAGVASRR ACEELIAAGR VSVDGQIVRR FGARVDPEKS
EIRVDGMRVV TSQNLRYYAL NKPRGVVSTM FDPEGRPTIG DYAAQIGPIE ERLFHVGRLD
TDTEGLILLT NDGELANRLT HPRYKVTKTY LAKVPGPVPR DVIRQIRKGV ELDDGFVKVD
SFRVIDNIEP KALVEIRLHE GRKHIVRRLM KAVGHPVSDL ARTQIGPVGL NNLKSGTIRA
LTSQEVSELY TAAGM
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