| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1183 |
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| Symbol | |
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| ID | 3580446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1379658 |
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| End bp | 1380644 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684879 |
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| Product | branched-chain amino acid transport system permease protein |
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| Protein accession | YP_289244 |
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| Protein GI | 72161587 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0528852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTC TGCAGGTCCT TGCCGACGCC ACGCGGTCGG CGATCGGCCC GGTGGCTGCC
GTTTACGCAC TCGCCGCCAT CGGTTTGAAC ATGCACTTCG GCTACACCGG CCTGCTCAAC
TTCGGGCAAG TGGGCTTCAT GCTCGTGGGC GGCTACGGTG TCGCGGTCAG CGTCAGCACC
TTCGGGCTCC CCCTGGGAGT GGGCTTCCTC ATCGGCATCG CCTCCGCCGT GGCCCTCGCC
CTGGTGCTCG GCCTACCGAC CCTGCGGCTG CGCGCCGACT ACCTGGCGAT CACGACAATC
GCGGTAGCCG AGGTGGCGCG GCTCATCTAC CGGGCCGAGT TCCTCCGCGA CATCACCGGC
GGTGTCTACG GCCTCCAGAG CTTCTCCACC GCCTTCTACC AGTGGAACCC CTTCCCCTCC
GGCACCTACG GTTTCGGGTG GCTGAGCTTC AGCGCCCGCG ACCTGTGGGT GATGACGGTG
ACGTGGGGCC TGGTGCTCGT CGGCAGCGCG GTCATGTGGC TGCTGATCCA CAGCCCGTGG
GGGCGGGTCA TCAAAGGCAT CCGCGAAGAC GAAGACGCGG TCCGCAGCCT CGGCAAGAAC
GTCTTCGTCT ACAAGATGCA GAGCCTGATC ATCGGCGGCG TCTTCGGCGC CCTGGCCGGC
GCCATGCTCG TGGTCAACCA GCAGACCATC ACCCCCGACC AGTTCATGCC GCAAGTGACG
TTCTACCTGT GGGCGATCCT CCTGCTGGGC GGTGCCGGGC GCACCCTCGG CCCGGTGCTG
GGATCGGTCG TCATGTGGTT CCTGCTGTCC GTGACCGACA GCGTGCTGCG CCAGCTCATC
GCCGCCGACG TGATCACCTT CATCGCCAGT TCCGAGATCG GCGGCGTGCG GCACGCCCTG
GTGGGTGTGG CGCTGCTGGT GCTGATCATC TTCCGGCCGC AGGGGCTCAT CGGCAACCGC
AAGGAGATGC TGATCAATGT CAAGTGA
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| Protein sequence | MDILQVLADA TRSAIGPVAA VYALAAIGLN MHFGYTGLLN FGQVGFMLVG GYGVAVSVST
FGLPLGVGFL IGIASAVALA LVLGLPTLRL RADYLAITTI AVAEVARLIY RAEFLRDITG
GVYGLQSFST AFYQWNPFPS GTYGFGWLSF SARDLWVMTV TWGLVLVGSA VMWLLIHSPW
GRVIKGIRED EDAVRSLGKN VFVYKMQSLI IGGVFGALAG AMLVVNQQTI TPDQFMPQVT
FYLWAILLLG GAGRTLGPVL GSVVMWFLLS VTDSVLRQLI AADVITFIAS SEIGGVRHAL
VGVALLVLII FRPQGLIGNR KEMLINVK
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