Gene Tfu_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1149 
Symbol 
ID3581195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1340832 
End bp1341509 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID637684844 
Productpeptidase S16, lon N-terminal 
Protein accessionYP_289210 
Protein GI72161553 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA CGTTGCCGCT CTTTCCACTC GGCTCGGTCC TCTTCCCTGG GATGACCATG 
GCCCTGCACG TGTTCGAGGA CCGCTATCTG ACCCTGGTGA ACGACCTGCT CAGCCTGCCG 
GCAGACCAGC CCCGCCGGTT CGGGGTCGTC GGCATCACCC TGGGCCACGA GGTCGGGGAG 
AAAGCAGCGC ACCAGTGGGC CGACGTGGGG TGCACCGCCG AGATCAGCAC GGTGCAGCGC 
CGTCCCAATT CGAGTGTCGA CCTCGTGGTC ACGGGGGTGG AGCGTTTCCG GGCGGTGGAG 
TGGCTCGCCC CGGATGGGAC CACGCCCTAC CTGCGGGCGC AGACGGTGCC GCTGGCGGAG 
GAGGTCGGCG AGGAGGCCGA GGTGTGGCGG GAGCGCGCCG CCCACCACTT CGCGGTGTAC 
TTGGAGCGTC TCGACCGGAT TGGGATCATC GTGGCCGACG ACACGGACCT TCCTAAGGAT 
CCGGTGGCGG CCTCCTACGC GTTGGCCGAC GCCATCGTGC TGGATATGCC GGACAAGCAG 
GCGCTGTTGG AGGCCGACTC CGCGGCGGAG CGGTTGGCCC GCGCCGTGGA GCTGCTCCGG 
CGAGAAAACC GGGTGCTTTC TGCGTTGCGG TTGCTTCCTG CGGGGCGCTT CCCGCACCAG 
GTGATCAACC TGAACTGA
 
Protein sequence
MSTTLPLFPL GSVLFPGMTM ALHVFEDRYL TLVNDLLSLP ADQPRRFGVV GITLGHEVGE 
KAAHQWADVG CTAEISTVQR RPNSSVDLVV TGVERFRAVE WLAPDGTTPY LRAQTVPLAE 
EVGEEAEVWR ERAAHHFAVY LERLDRIGII VADDTDLPKD PVAASYALAD AIVLDMPDKQ 
ALLEADSAAE RLARAVELLR RENRVLSALR LLPAGRFPHQ VINLN