| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1120 |
|---|
| Symbol | ileS |
|---|
| ID | 3579322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1305238 |
|---|
| End bp | 1308420 |
|---|
| Gene Length | 3183 bp |
|---|
| Protein Length | 1060 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637684815 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_289181 |
|---|
| Protein GI | 72161524 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.774761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAAGG AGTCGACTCG ACCGTTCCCC ACGCTTCCCG CCCAGATCGA CCTGCCTGCG
ATGGAGCACG AGGTGCTGCG GCGGTGGGAA GAACACAAGA TCTTCGAACG GTCCCTAGAG
CAGACACAGG GCGGCCCGAC CTGGGTGTTC TACGAGGGTC CCCCGACCGC GAACGGGACG
CCCGGCGTGC ACCACGTCGA GGCGCGCGTA TTCAAGGACG TGTTCCCCCG GTTCAAGACG
ATGAAGGGGT TCTACGTCGA ACGCAAGGCC GGGTGGGACT GCCACGGCCT GCCCGTTGAG
GTCGCCGTCG AAAAAGAACT GGGGATCTCC GGCAAGAAGG ACATCGAGGC GTTCGGGATC
GCCGAGTTCA ACGCCCGCTG CCGCGAGTCG GTGCTGCGGA ACGTGGACGC GTTCACCGAG
ATGACGCGGC GCATGGGCTA CTGGGTCAAC ATGGACGAGG CCTACCGCAC CATGGACCGC
GAATACGTGG AGTCGGTGTG GTGGGCGATC AAGCAGATCT GGGACAAGGG CCTGCTGGTT
CAGGACTACC GGATCAGCCC GTACTGTCCG CGTTGCGGCA CCACCCTGTC CGACCACGAG
CTCGCGCAGG GCTATGAGAC AGTCACCGAC CCGTCGGTGT ATGTGCGGTT CCCGCTGACG
TCCGGCCCGC TCGCCGGGCA GGCCGCGCTG CTGGTGTGGA CCACGACCCC GTGGACCCTG
GTGTCCAACA CGGCTGTGGC CGTGCACCCC GAGGTGGACT ATGTGGTGGC CACGGACGGT
TCTGAGCAGT TGGTCGTGGC CGAGCCGCTG GTGGGTGCGG CGCTGGGTGA CGGCTGGACG
CTGACCGGGC AGCGGTTCAA AGGCGCGGAG CTGGAACGCT GGACCTACCA GCGGCCGTTC
GAGCTGGTGG AGTTCGACTC CCCCGCGCAT TTCGTGGTGC TCGGCGACTA TGTGACCGTC
GAGGACGGTA CCGGCCTGGT GCACCAGGCG CCCGCGTTCG GTGCGGACGA CATGCAGGTC
TGCCGCGCTT ACGGGCTGCC CGTGGTCAAC CCGGTGCGCA ACGACGGCAC GTTCGAGGAG
CACCTGGACC TGGTGGGCGA CGAGTTCTTC AAGACCGCGG ACGCTGCCCT CGTGGCGGAC
CTGAAGGACC GCGGCCTGCT GTTCAAGCAC CTCGACTACG AGCACAGCTA TCCGCACTGC
TGGCGTTGCC ACACTCCGCT GATGTACTAC GCGGTGCCGT CGTGGTACAT CAAGACGACC
GCGATCAAGG ACCAGTTGCT GGCGGAGAAC GCCAAGACCA ACTGGGTTCC GGCGAACGTC
AAGGACGGAC GTTACGGGGA GTGGCTGCGC AACAACGTCG ACTGGGCGCT GTCCCGCAGC
CGCTACTGGG GCACACCGCT GCCGATCTGG GAGTTCCCGG ACGGTCGGCG GATCTGTGTG
GGCTCCTTGA AGGAGCTGAG CGAGCTGAGC GGGCAGGACT TGTCCGACCT GGACCCGCAC
CGCCCGTACG TGGACGACAT CGTCATCCCC GACCCGGACG CGGACCCGTC GCTGCCGCTG
GAGCAGCGGG TGGCCCGCCG GGTGCCGGAA GTCATCGACG TGTGGTTCGA CTCCGGTGCG
ATGCCGTTCG CGCAGTGGGG TGCCCCGCAC CGCAACCAGG AGAAGTTCGA AGCGAACTTC
CCCGCCCAGT ACATCTGCGA GGCGATCGAC CAGACCCGCG GCTGGTTCTA TTCGCTGATG
GCGGTCAGCA CGCTGGTCTT CGGCCGCTCC TCGTACGAGA ACGTGGTCTG CCTGGGCCAC
ATCCTCGCCG AAGACGGCCG CAAGATGAGC AAGCACCTGG GCAACATCCT GGAGCCGATC
CCTGTCATGG ACCGGCACGG CGCTGACGCG CTGCGCTGGT TCATGGCGGC CAGCGGTTCG
CCGTGGATGC CGCGCCGGGT CGGGCACACG GTCCTGGAGG AGATTGTCCG CAAGGTCCTG
CTCACCTACT ACAACTCGGC GTCCTTCTTC ACCTTGTACG CGGGTGCGGG CGACGGGTGG
AGCCACGAGC AGTTGGCGGA CGCGCCGGCG CCGCAGGACC GGCCGCTGCT GGACCGCTGG
ATCCTCTCCG AGCTGCACTC GCTGATCAAG ACCGTGGACG ACGCGTTGGA GCGGTTCGAC
ACGGCGCTGG CGGGCCGGGC GTTGACCACG TTCATCGACG ACCTGTCCAA CTGGTATGTG
CGCCGGTCGC GCCGCCGGTT CTGGGCGGGT GCGGGCACGC CTGAGGGGGC TGCGGCATTC
GCCACCCTGT TCGAATGCTT GGAGACCCTC ACCCTGCTGA TGGCGCCGAT CGTGCCGTTC
ATCACCGACC ACGTGTGGCA GGCGCTGCGC CGTCCGGATG CTCCGGAGTC GGTGCACTTG
GCGTCGTGGC CGAAGGCCGA CGAGTCGCTG ATCGACCCTG CGCTGTCGGA GCAGATGGCG
CTGGTGCGCC GCCTGGTGGA GCTGGGCCGG GCGGCCCGGG TGGACTCGGG GCAGCGGGTC
CGCCAGCCGC TGGCGCGGGC GCTCGTGGGT GCCCCGGGTT TTGCGGAGCT GCCGGAGCAG
TTGCGCGCGC AGATCGCGGA AGAGCTCAAC GTGGTGCAGC TCGACCCGCT GTCGGTGGTC
GGCGGCGACC TGGTGGACTA CTCGGTGAAG CCGAACTTCC GTGCCCTGGG CAAGCGGTTC
GGCAAGACCA CGCCGCGGGT CGCCCAGGCG ATCCGGGAGG CCGACGCTAA GACGCTGGTG
GAGCGGCTGC GCGCGGACAA TGCGGCGACC GTGGACGTCG ACGGGGAGCA GGTGGTGCTC
TCCGCTGACG AAGTGGTGGT CACCGAGCAG CCGCGGGAAG GCTGGACGGT GGCGTCGGAG
GCCGGTGAGA CGGTGGCGTT GGACTTGGAG TTGACGCCGG AGCTGCGCCG GGCCGGTGTT
GCCCGCGAGG TGATCCGTCT GGTGCAGGAT GCGCGCAAGT CCAGCGGGTT GAACATCTCC
GACCGTATCC ACCTGTGGTG GTCGGCGACC GACGAGATGA CAGCGCAGGC CATGGCTGAG
CACGCGGAGG CGATCAGCAG CGAAGTGCTG GCGGTGTCCT TCACCGAGGG CACTGGCGAC
GCCGACGCCT ACGAGGTCGT CTCGGAGGAG TTCGGGATCA CCCTGCGGCT GCGGAAGGCC
TAA
|
|---|
| Protein sequence | MSKESTRPFP TLPAQIDLPA MEHEVLRRWE EHKIFERSLE QTQGGPTWVF YEGPPTANGT
PGVHHVEARV FKDVFPRFKT MKGFYVERKA GWDCHGLPVE VAVEKELGIS GKKDIEAFGI
AEFNARCRES VLRNVDAFTE MTRRMGYWVN MDEAYRTMDR EYVESVWWAI KQIWDKGLLV
QDYRISPYCP RCGTTLSDHE LAQGYETVTD PSVYVRFPLT SGPLAGQAAL LVWTTTPWTL
VSNTAVAVHP EVDYVVATDG SEQLVVAEPL VGAALGDGWT LTGQRFKGAE LERWTYQRPF
ELVEFDSPAH FVVLGDYVTV EDGTGLVHQA PAFGADDMQV CRAYGLPVVN PVRNDGTFEE
HLDLVGDEFF KTADAALVAD LKDRGLLFKH LDYEHSYPHC WRCHTPLMYY AVPSWYIKTT
AIKDQLLAEN AKTNWVPANV KDGRYGEWLR NNVDWALSRS RYWGTPLPIW EFPDGRRICV
GSLKELSELS GQDLSDLDPH RPYVDDIVIP DPDADPSLPL EQRVARRVPE VIDVWFDSGA
MPFAQWGAPH RNQEKFEANF PAQYICEAID QTRGWFYSLM AVSTLVFGRS SYENVVCLGH
ILAEDGRKMS KHLGNILEPI PVMDRHGADA LRWFMAASGS PWMPRRVGHT VLEEIVRKVL
LTYYNSASFF TLYAGAGDGW SHEQLADAPA PQDRPLLDRW ILSELHSLIK TVDDALERFD
TALAGRALTT FIDDLSNWYV RRSRRRFWAG AGTPEGAAAF ATLFECLETL TLLMAPIVPF
ITDHVWQALR RPDAPESVHL ASWPKADESL IDPALSEQMA LVRRLVELGR AARVDSGQRV
RQPLARALVG APGFAELPEQ LRAQIAEELN VVQLDPLSVV GGDLVDYSVK PNFRALGKRF
GKTTPRVAQA IREADAKTLV ERLRADNAAT VDVDGEQVVL SADEVVVTEQ PREGWTVASE
AGETVALDLE LTPELRRAGV AREVIRLVQD ARKSSGLNIS DRIHLWWSAT DEMTAQAMAE
HAEAISSEVL AVSFTEGTGD ADAYEVVSEE FGITLRLRKA
|
|---|
| |