Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1076 |
Symbol | |
ID | 3580068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1257699 |
End bp | 1259129 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637684771 |
Product | putative RNA-binding Sun protein |
Protein accession | YP_289137 |
Protein GI | 72161480 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0188597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAGA GATTCTCATC CCCGTACCGC ACGACCCGGC GCAGCCCTCG CGGTTCCGCG TCGCGGACCC GCCCCCGGGA CCCGGCCCGC CGCGTCGCCT ACGACGTGCT GTACGCAGTC CAGACCCGCG ACGCCTACGC CAACCTGCTG CTGCCCGTCC TCCTCCGCGA ACGGGGGATC ACCGGACGGG ACGCCGGGCT CGCCACCGAG CTGACCTACG GGACTCTGCG CCTCCAAGGC TCCTACGACG CTGTCCTGGA CGCCTGCGTG GACCGCTCCC TGCGCTCCGT CGACACCGAA GTCCTCCCCC TGCTGCGCAT GGGCGCCCAC CAACTGCTGT CCATGGACGT CCCCCCGCAC GCCGCGGTCA GCAGCACCGT CGACCTGGCC CGCCGGATCG TCGGCCACCA CCGCGCCAGA TTCGTCAACG CGGTCCTGCG CAAAGTCACC GCACGCGACC TCACCGGATG GCTGAGCGTG CTCGCCCCCG ACCGGAAGAC CGACCCTGTC GGACACCTCG CGATCACCCA CAGCCATCCC CGCTGGGTGG TCCAGGCGTT CGCGGAAGCG CTCGGCGACG AGACCAGCAG CGGCCTGAAA GAGACCGAAC GGCTCCTCAC CGCCCACAAC GAGCGGCCCC GCGTCACCCT GCTCGCCAAA CCCGGGCGCG CCACCGTCAC CGACCTGGTC GACGAAGGCG CTGTCGCCGC CCGCTACTCG CCGTACGGGG CGGTCCTCCC GGAAGGGGAC CCCGGCATGC TGCGCCTGGT CCGCCAAGGC CGCGCCGTCG TGCAGGACGA AGCCAGCCAG CTCGTCGCTC TGGCCCTGAG CCGGGTGCCG GTCTCCGGCC CTGACCAGCA GTGGTTGGAC ATGTGCGCCG GACCGGGCGG AAAAGCCGCC CTCATGGCCG GACTCGTGGG GGAGCGCGGC GGACGCCTGC TCGCCGCCGA AGTGCAGCCC GCACGGGCCG GACTGGTCGC CCGCGCCGTC CACCGGTCGC TCGGCAACTC CGCCCGCGTC ATCGTGGCCG ACTCCACCCA GCCGCCGTGG CGGGACGGCA TTTTCGACCG GGTGCTCGTC GACGCGCCGT GCACCGGCCT GGGCGCGCTG CGCCGCCGCC CCGAGTCGCG GTGGCGGCGC ACCCCGGAGA ACCTCGCCGA ACTCGTCCCG CTGCAGCGCG CCCTGCTCAA CCGGGCCCTG GACGCGGTCC GCCCCGGCGG AGTGGTCGGC TACGTCACCT GCTCACCGCA CCTCGCGGAG ACCCGCGGCG TCGTTACCGA CGTCCTCGCC GGACGCGACG ACGCGGACCT GCTCAACGCT GCCCGCCACC TGCCGGAAGT CCCCGACGTC GCCGCCGACC GCTTCGTGCA GTTCTGGCCG CACCGTCACG GCACCGACGC GATGTTCCTG GCGCTGCTGC GGAAACGCTG A
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Protein sequence | MTQRFSSPYR TTRRSPRGSA SRTRPRDPAR RVAYDVLYAV QTRDAYANLL LPVLLRERGI TGRDAGLATE LTYGTLRLQG SYDAVLDACV DRSLRSVDTE VLPLLRMGAH QLLSMDVPPH AAVSSTVDLA RRIVGHHRAR FVNAVLRKVT ARDLTGWLSV LAPDRKTDPV GHLAITHSHP RWVVQAFAEA LGDETSSGLK ETERLLTAHN ERPRVTLLAK PGRATVTDLV DEGAVAARYS PYGAVLPEGD PGMLRLVRQG RAVVQDEASQ LVALALSRVP VSGPDQQWLD MCAGPGGKAA LMAGLVGERG GRLLAAEVQP ARAGLVARAV HRSLGNSARV IVADSTQPPW RDGIFDRVLV DAPCTGLGAL RRRPESRWRR TPENLAELVP LQRALLNRAL DAVRPGGVVG YVTCSPHLAE TRGVVTDVLA GRDDADLLNA ARHLPEVPDV AADRFVQFWP HRHGTDAMFL ALLRKR
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