Gene Tfu_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1003 
Symbol 
ID3579263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1179574 
End bp1180044 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID637684698 
Producthypothetical protein 
Protein accessionYP_289064 
Protein GI72161407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000913134 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAA GCGACTCTGC GCCTTTCGAC CCTGAGTGGT TCACGAAAGA ACTGATGGAA 
CGGGGAATCG CCACCCCGGA GCAGATCACA GGCTGCACCC CGGAAGAAGT CGCCGAGGTG
CTCGCGGAGA AAAAGGACGT TTCCGTGCCG CAAGCCTACG TCGACTTTCT ACGGTGCGCC
GGGCGGAGCG CAGGAAGCCT CTTCCAAGGC TCCGACATCC ACTATCCGGA CTGCCTGGGG
ATCAACGCAT ATGCCGAAGA GTTCGCGCGG GACGACGACC CTGGGCTCAC CACGGAAGGG
CGGTTCTTCT TCTACGTCCA CCAGGGCTAC GCGTTCTACT TCTTCGAACA CGGCAAAGAC
GGCGTCTGGA GCTACGTCGA AGGAGACGGC GAGCCGCGGA AGTACGCGGC CACGTTCGTC
GAATTCCTCA GCAGCCAGCT CGACAACGCC ACCCGGACGG CACGCCGGTA G
 
Protein sequence
MGRSDSAPFD PEWFTKELME RGIATPEQIT GCTPEEVAEV LAEKKDVSVP QAYVDFLRCA 
GRSAGSLFQG SDIHYPDCLG INAYAEEFAR DDDPGLTTEG RFFFYVHQGY AFYFFEHGKD
GVWSYVEGDG EPRKYAATFV EFLSSQLDNA TRTARR