Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1003 |
Symbol | |
ID | 3579263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1179574 |
End bp | 1180044 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637684698 |
Product | hypothetical protein |
Protein accession | YP_289064 |
Protein GI | 72161407 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000913134 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAA GCGACTCTGC GCCTTTCGAC CCTGAGTGGT TCACGAAAGA ACTGATGGAA CGGGGAATCG CCACCCCGGA GCAGATCACA GGCTGCACCC CGGAAGAAGT CGCCGAGGTG CTCGCGGAGA AAAAGGACGT TTCCGTGCCG CAAGCCTACG TCGACTTTCT ACGGTGCGCC GGGCGGAGCG CAGGAAGCCT CTTCCAAGGC TCCGACATCC ACTATCCGGA CTGCCTGGGG ATCAACGCAT ATGCCGAAGA GTTCGCGCGG GACGACGACC CTGGGCTCAC CACGGAAGGG CGGTTCTTCT TCTACGTCCA CCAGGGCTAC GCGTTCTACT TCTTCGAACA CGGCAAAGAC GGCGTCTGGA GCTACGTCGA AGGAGACGGC GAGCCGCGGA AGTACGCGGC CACGTTCGTC GAATTCCTCA GCAGCCAGCT CGACAACGCC ACCCGGACGG CACGCCGGTA G
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Protein sequence | MGRSDSAPFD PEWFTKELME RGIATPEQIT GCTPEEVAEV LAEKKDVSVP QAYVDFLRCA GRSAGSLFQG SDIHYPDCLG INAYAEEFAR DDDPGLTTEG RFFFYVHQGY AFYFFEHGKD GVWSYVEGDG EPRKYAATFV EFLSSQLDNA TRTARR
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