Gene Tfu_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0987 
Symbol 
ID3579000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1159180 
End bp1159503 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content68% 
IMG OID637684682 
Productsmall multidrug resistance efflux protein 
Protein accessionYP_289048 
Protein GI72161391 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.25874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTGGC TGCTCCTCAT CGGTGCGATC CTCACCGAAG TCACCGGAAC CATCTCACTC 
CGGCTCTCCG ACGGGTTCAC CCGTCTCGTG CCGTCCCTCA TCGCGCTCAC CAGCTACGGG
ATCGCGTTCA CCCTGCTCGC CCAAGTCCTC AAACTCGGCA TGGGCGTCGG CGTGGCCTAC
GGCATCTGGT CGGCGCTGGG CGTCACCCTC GTCGCGGTCA TCGGCGCCGT GTTCCTCGGC
GACACCCTCA CCTGGGTCCA GATCGTCGGC ATCGTCCTCG TCATCGCGGG CGTCGCCGCC
CTCGAACTCG GCGCGGCCCG CTAG
 
Protein sequence
MQWLLLIGAI LTEVTGTISL RLSDGFTRLV PSLIALTSYG IAFTLLAQVL KLGMGVGVAY 
GIWSALGVTL VAVIGAVFLG DTLTWVQIVG IVLVIAGVAA LELGAAR