Gene Tfu_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0974 
Symbol 
ID3579176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1142886 
End bp1143740 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID637684669 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_289035 
Protein GI72161378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGGA GCTACAGTCC GACCATCCGC CGACGGCGGA TCTCTGCACA GTTACGGAAG 
TTCCGCAAGC AGAAGGGACT CTCGGCAGCC GCAGTAGGTG AGAAGCTGGG CTGGCCACAG
CAGAAGATCT CCAAGATCGA GAGCGGCGAA CAAAAGAGAA TCCCAGCGGC CGAGCTCGAC
GCTCTCCTAG AGGTCTACGG TGTCACCGAC CCTCAGATAC GCGAGTCCTT GCACGAGTGC
GCCCGCCTTG CCAAGGAACG CGGTTGGTGG ACCAGGTACA AGGACGCTTT CCCTAGCGGT
CTTCCAGACT TCGAGAGCGA AGCTTCCGTC ATCCGCTCCT ATGAGTGTCA GGTCATCCCC
GGCATACTCC AAACACCCGA CTATGCCGAC GCAATCTTCC GGGCCTACAA ACTCCGCGAA
GACAAGGAGA TCGATCGTCT AGTCAAGGCC CGCATGGAAC GGCAGAACAT CCTCAACCGG
GTCGATCCGC CACACTTCAT GACCATCATC GATGAGGCAG CGCTCCATCG CCTCGTCGGT
TCGGTTGAGG TCATGCGCAC CCAGCTTCGT CATCTGACTC ACATGGCTTC CCGGCACAAC
ATCGACATCT ACGTGCTGCC GTTCAAGGCG GGGGCGCATG CCGCAACCAC CGGAAGTTTC
ATGATCATGG ACTTCCCCGA CCCAATGGAC AACAGCATCG TCTACGTCGA CACCCCGACT
TCTATCCTGT ACATCGAAGA TGAAGAGGAA GTCAGGGAGT TCAACGTGAT GTTCAGCCGT
ACCCAGTCGG CGGCGTTGAG CCCGACACTG TCGATGGACC TGGTCAAAAA AGTTATCAAG
TCACTAGAAG AGTGA
 
Protein sequence
MQRSYSPTIR RRRISAQLRK FRKQKGLSAA AVGEKLGWPQ QKISKIESGE QKRIPAAELD 
ALLEVYGVTD PQIRESLHEC ARLAKERGWW TRYKDAFPSG LPDFESEASV IRSYECQVIP
GILQTPDYAD AIFRAYKLRE DKEIDRLVKA RMERQNILNR VDPPHFMTII DEAALHRLVG
SVEVMRTQLR HLTHMASRHN IDIYVLPFKA GAHAATTGSF MIMDFPDPMD NSIVYVDTPT
SILYIEDEEE VREFNVMFSR TQSAALSPTL SMDLVKKVIK SLEE