Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0950 |
Symbol | |
ID | 3579191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1118547 |
End bp | 1119902 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684645 |
Product | NADH dehydrogenase |
Protein accession | YP_289011 |
Protein GI | 72161354 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.954008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGGC CGCGCATCGT CGTGGTCGGC GCGGGTTTTG CGGGTCTGAC CGCGCTGCGC CGACTCGAAC AGAGGATTCC GGAAGGCAAG GCCGAGATCG TACTCGTCGC ACCCAACGAC TACATGCTCT ACCAGCCGCT GCTGCCCCAA GTGGCGTCCG GCCTGCTGAC CCCGCAGTCG ATCGCTGTCT CTCTGCACCG GCAACTGCAC CGCACCCACA TCATTCCGGG GATCGCCGTC GGCTTGGACA CGGACCGGAA CACGGTGGTG GTCCGCAAGA TCTCCGGCGA GTACTCCTAT GAGCGCTACG ACCGGCTGAT TCTGGCGCCC GGCAGCGTGA CCCGGACGTT CAACATCCCC GGGCTGATCG AGCACGCCCG CGGCAACAAG AACCTGGCCG AGGCGGTGTA CTTGCGCGAC CACGTGCTGG CCCAGCTGGA GTTGGCGAAC GCCAGCGACG ACCCGGCGGA GCGCGACGAG CGGTGCACGT TCATCGTGGT GGGCGGCGGC TACACAGGGG TGGAGACCGC GGCGTCCTTG GAGCTGCTGT GCGAGGCAGC GTGCAAGCAG TATCCGAAGC TGCGCCCGCA CATCCAGTGG CACGTAGTGG ACATCGCCCC CCGCTTGATG CCGGAGCTGG GCGAGCATCT GGGGCAGAAG ACGATGGAGC TGCTGCGCCA GCGCGGGATC GAAGTGTCGC TGGGGGTGTC GGTCCGCGAG GTGACCGAGG ACAAGGTGAC GTTGACCGAC GACCGGGTGC TGCCGTGCCG CACGTTGATC TGGACGGCGG GCACTGCGCC GAGCCCGCTG ATCGCGGCGA CCGGGCTGCC CACGGAACGC GGGAAGCTCT CGGTGGGCGC GGACTTGTCG GTGCCCGGGC ATCCGGAGAT TTTCGGGATC GGTGATTCCG CCGCCGTCCC CGATTTGAGC AAGGGCGAGG ACGGGGCGCT GTGCCCGCCT ACCGCCCAGC ACGCGTCCAC CCAGGGGCCG GTGGCGGCCG ACAACGTGAT TGCTTCGCTG CTGGGCCGGT CGACGAAGCA CTACTACTAC CGGGACCGCG GCCTGCTCGT GGATTTGAGC GGCCGGGACG CGGTGGCCCG CCCCTTCGGG GTGGAGTTCA ACGGGACCGC GGCCTTGGCG TTGACCCGGG CCTACCACTT GTATTCGCTG CCGTCGGGAC CGGCCCGGAT GCGGGTGGCC GCCAACTGGC TGATCCAGGC GCTGCTGGGC TGCGACGTGT CCCGCCTGGG GTTCCTCAAC CGCAGCGTGG AGACGCTGGT GGACGTGGAG GAGTACTCCC GCTACCTCAA ACCCGAGCAG GCCAAGGAGC GGGTGGGGCT GGCCGTGGGC GGATAG
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Protein sequence | MARPRIVVVG AGFAGLTALR RLEQRIPEGK AEIVLVAPND YMLYQPLLPQ VASGLLTPQS IAVSLHRQLH RTHIIPGIAV GLDTDRNTVV VRKISGEYSY ERYDRLILAP GSVTRTFNIP GLIEHARGNK NLAEAVYLRD HVLAQLELAN ASDDPAERDE RCTFIVVGGG YTGVETAASL ELLCEAACKQ YPKLRPHIQW HVVDIAPRLM PELGEHLGQK TMELLRQRGI EVSLGVSVRE VTEDKVTLTD DRVLPCRTLI WTAGTAPSPL IAATGLPTER GKLSVGADLS VPGHPEIFGI GDSAAVPDLS KGEDGALCPP TAQHASTQGP VAADNVIASL LGRSTKHYYY RDRGLLVDLS GRDAVARPFG VEFNGTAALA LTRAYHLYSL PSGPARMRVA ANWLIQALLG CDVSRLGFLN RSVETLVDVE EYSRYLKPEQ AKERVGLAVG G
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