| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0915 |
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| Symbol | |
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| ID | 3579215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1077129 |
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| End bp | 1079651 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684610 |
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| Product | beta-mannosidase |
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| Protein accession | YP_288976 |
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| Protein GI | 72161319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.765709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAACACC GCTTCACCTG TGGAGACGCC ATGGCAGTGC GCATCGAACT GCGCGAGAAC
TGGGTCCTCC GTGCGGACGA TCCCGCCGAG GTTCCAGTGG AGATCGGCCC TGCGGGGATA
CCGGCGACCG TGCCGGGATG CGTGCACACC GACCTCATGG CGGCGAACCT CATTCCCGAC
CCTTACCAAG GTCGCAACGA GACCGAGCTC GGCTGGATCG GCCGCACCCA GTGGAGCTAC
ACGACCACCT TCGACGCCAC CGCACTGGCT GAGGCAGAAC GGATCGACCT GGAATGCGCC
GGACTGGACA CCGTGGCCAC GGTGTTCCTC AACGGTACGG AAGTCGGCCA GAGCCGCAAT
ATGCACCGCT CCTACCGTTT CGACCTGCGC CGGGCGCTCC GAGACGGCAC TAACGAACTG
AGGGTCGAGT TCGCCTCCCC CTACAGCTAC GCCACGGCGC TCCGCGACAA GCTCGGGGAC
CGGCCCAACG CCTACCCCGA GCCGTTCCAG TTCATCCGCA AGATGGCCTG CAACTTCGGC
TGGGACTGGG GCCCCACCCT CGTCACCTCG GGGATCTGGC GGCCGATCCA CGTGCACGCG
TGGCACACGG CCCGCCTAGC CCAGGTCGTC CCCCTGATCA CCGTGGCCCG CACCCACGAC
GGCAGCCTGG AGGGCCGCGT CCTGGTGCGG GTGGAGGTGG AGCGGAGCGA GCACGGGGAG
GACACCGAGC TGGTCGTGCG CGTCCGGATC GCCGACCGGG AGCAGTCAAT CGCCGTCCCC
GCCGGGGTGT GCCGTACCGA ACTGGAGGTC ACCGTCCCCG ACCCCGACCT CTGGTGGCCC
CGCGGCTACG GTGACCAGCC GCTCTACGAC CTGCGCGTCG ATCTGGCCGC TCACGGGGAG
GAACTGGACA CCTGGCAGCG CCGGATCGGG TTCCGCACGG TCGAGCTCGA CACCGGTGTC
GACGAGGACG GCCGCCGGTT CACCATCGTC GTCAACGGGG TGCCCGTCCT CGTCAAGGGC
GCCAACTGGA TTCCCGACGA CTGTTTTGTG AGCCGGGTGG GGCGCGACCG CTACGCCGCG
CGGATCGACC AGGCGGTCGC GGCCAACATG AACCTGCTGC GGGTGTGGGG CGGCGGCCGC
TACGAGAGCG AGGACTTCTA CGAGCTGTGC GACGAGCGCG GCATCCTCGT CTGGCAGGAC
TTCCTGTTCG CCTGCGCCGC CTACCCCGAG GAGCCGCCGA TCACTGAAGA GGTCGAGGCC
GAGGCCCGCG AAGTGGTGGC CCGGCTCGCC CCCTACCCCA GCCTGGTGCT GTGGAACGGC
AACAACGAGA ACATCTGGGG CTACTGGGAC TGGGGCTGGA AGGAGGAGCT GGCGGGCCGG
AGCTGGGGCG AAGGCTACTA CCTGGAGCTG CTGCCGCGGA TCGTCGCCGA GGTCGACCCT
ACGCGCCCCT ACTGGCCGGG CAGCCCGTAC TCCGGGGTGC CGGACATCCA CCCCAACGAC
CCGCGGTACG CCTCCATCCA CATCTGGGAC GTGTGGAACG AGGTGGACTA CACCGCCTAC
CGCAACTACC GGCCCCGGTT CGTGGCCGAG TTCGGGTTCC AGGCCCCGCC CACCTACGCC
ACGCTGCGCT CCGCCCTGCC CGGAGAGGAG CTGCGACCGG ATTCGCCGGG CATGCTGCAC
CACCAGAAGG CGGTCGACGG CAACGGCAAG CTCGCCCGCG GCCTGGCCCC GCACTTCGGC
AACCCTGCCG ACTTCGACGA CTGGCACTAT CTGACCCAGG TCAACCAGGC GCGCGCGATT
ACTCTGGGCA TCGAGCACTT CCGCGCCCAG TGGCCCCGGT GCACGGGGAG CGTGGTCTGG
CAGCTCAACG ACTGCTGGCC GGTGACGTCG TGGTCGGCTG TGGACGGCGA AGGCCGGCGC
AAACCGCTGT GGTACGCCCT GCGGGCGGTC TACGCCGAGC GGCTGGCCAC GGTGCAGCCT
GACGGCGACG GCCTGGTCCT CGTCGTGGCA AACGACAGCA ACCGGGAGTG GACCGGGACC
GCGCACCTGG CCCGGCGGGC CTTGGACGGC ACGGTGCTGG CCGCGGCCGA TGCCCCGTTC
ACTGTGCCTG CCCGCGGCGC CGTCCGGGTG CCGCTGCCCG CCGAGGTGGC GCGCCCCGGG
GATGCGACCC GGGAATTGAT TACCGCGGAC ACGGGGGCAC GCCGAGCGTA CTGGTTCTTC
GCTGAGGACC GCGAGATCGC CTATCCGGCG CCGGAGTACG ACACCCGTGT CGTGCCGCGT
GGCGCGGACC TGTGCGTGAC CGTGACGGCG CGGAGCCTGC TGCGCGACCT CTCCCTGTTC
GCGGACCGCC TCGATCCGGG GGCCGAGGCG GATGACATGC TGGTCACCCT CCTGCCGGGA
GAGTCGCACA CGTTCACGGT GCGCGGCGGT GCCCACCTCG ACCCTGCCCA GGTGGTCCAG
CCGCCCGTGC TGCGCACCGT CAACGACGCG CTGCGCGCCG CGCAGGACAG CATCCCGGTC
TGA
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| Protein sequence | MQHRFTCGDA MAVRIELREN WVLRADDPAE VPVEIGPAGI PATVPGCVHT DLMAANLIPD
PYQGRNETEL GWIGRTQWSY TTTFDATALA EAERIDLECA GLDTVATVFL NGTEVGQSRN
MHRSYRFDLR RALRDGTNEL RVEFASPYSY ATALRDKLGD RPNAYPEPFQ FIRKMACNFG
WDWGPTLVTS GIWRPIHVHA WHTARLAQVV PLITVARTHD GSLEGRVLVR VEVERSEHGE
DTELVVRVRI ADREQSIAVP AGVCRTELEV TVPDPDLWWP RGYGDQPLYD LRVDLAAHGE
ELDTWQRRIG FRTVELDTGV DEDGRRFTIV VNGVPVLVKG ANWIPDDCFV SRVGRDRYAA
RIDQAVAANM NLLRVWGGGR YESEDFYELC DERGILVWQD FLFACAAYPE EPPITEEVEA
EAREVVARLA PYPSLVLWNG NNENIWGYWD WGWKEELAGR SWGEGYYLEL LPRIVAEVDP
TRPYWPGSPY SGVPDIHPND PRYASIHIWD VWNEVDYTAY RNYRPRFVAE FGFQAPPTYA
TLRSALPGEE LRPDSPGMLH HQKAVDGNGK LARGLAPHFG NPADFDDWHY LTQVNQARAI
TLGIEHFRAQ WPRCTGSVVW QLNDCWPVTS WSAVDGEGRR KPLWYALRAV YAERLATVQP
DGDGLVLVVA NDSNREWTGT AHLARRALDG TVLAAADAPF TVPARGAVRV PLPAEVARPG
DATRELITAD TGARRAYWFF AEDREIAYPA PEYDTRVVPR GADLCVTVTA RSLLRDLSLF
ADRLDPGAEA DDMLVTLLPG ESHTFTVRGG AHLDPAQVVQ PPVLRTVNDA LRAAQDSIPV
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