| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0874 |
|---|
| Symbol | |
|---|
| ID | 3579562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1030496 |
|---|
| End bp | 1031278 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637684568 |
|---|
| Product | 3-oxoadipate enol-lactonase |
|---|
| Protein accession | YP_288935 |
|---|
| Protein GI | 72161278 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.839441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTG ATGTGCACTA CACCGTGGAC GGTCCCGAAG ACGGGCCCGT CGTCGTGCTC
AGCGGTTCGC TGGGCAGCCG CCTCGACATG TGGGATCCGC AGATGGCGGG ACTCACCGGA
CAGTTCCGCG TCGTCCGCTA CGACCTCCGC GGCCACGGCT CCTCCCCGGT TCCCCCCGCG
CCCTACACCA TGGCGGACCT CGGCTCTGAC GTGCTGCGGC TCCTCGACCG GCTGAAAGTG
GAGCGCGCCC ACTTCGCGGG CCTGTCCATC GGCGGGATGA CCGGCATGTG GCTGGCCGCG
AACGCCCCGG AACGGATCGA CCGCCTGGCC CTGCTGTGCA CGTCGGCGAC ACCCCCCGGC
ACGCCGGAAG CGTGGGAGGA GCGCATCCGG ACAGTGCGCA CTCAAGGCAC GGCCGCGATC
GCGCCGACCG TGGTATCCCG CTGGTTCACC CCCGCCTATG CGGAACGCGA CCCTGAGACG
GTGTCCCTGT TCATCGACAT GATCGCGAAC ACCCCCGACG AGGGGTACGT GGGCTGCTGC
AACGCCATCC AGACCATGGA CCTGCTTCCG GGGCTGCCTT CGATCACCGC GCCCACCCTG
GTCGTGGCGG GCAAACTGGA TCCCACCTCC CCGCCGGAGC ACGCCGAGCT CATCGCGTCG
CGCATCCCCA ACGCCCGCAT GGAGGTCATC CCGGACGCCG CCCACCTGGC GTCGTGGGAG
CAGGCGACCT TCGTCAACGA ACTGCTCCTC GACCACTTCG GCCGGTCGTC CGCTGCTGCC
TGA
|
|---|
| Protein sequence | MSVDVHYTVD GPEDGPVVVL SGSLGSRLDM WDPQMAGLTG QFRVVRYDLR GHGSSPVPPA
PYTMADLGSD VLRLLDRLKV ERAHFAGLSI GGMTGMWLAA NAPERIDRLA LLCTSATPPG
TPEAWEERIR TVRTQGTAAI APTVVSRWFT PAYAERDPET VSLFIDMIAN TPDEGYVGCC
NAIQTMDLLP GLPSITAPTL VVAGKLDPTS PPEHAELIAS RIPNARMEVI PDAAHLASWE
QATFVNELLL DHFGRSSAAA
|
|---|
| |