Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0861 |
Symbol | |
ID | 3579643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1013492 |
End bp | 1014880 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637684554 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_288922 |
Protein GI | 72161265 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.651582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCTA AGTCAGAGGC AATGGACACC CTGGTCAGTC TTGCCAAGCG CCGGGGATTG GTCTACCCCT CGAGCGAGAT CTACGGGGGT CTGCGCGCCT CGTGGGACTA CGGCCCTCTG GGCGTGGAGC TGAAGAACAA CGTCAAGCGC CAGTGGTGGC GCGCCATGGT CCAGGAGCGT GAGGACATCG TCGGCCTCGA CTCCTGCGTC ATCCTGGCCC GTGAGGTCTG GGAGGCGTCC GGCCACGTCG ACGCCTTCGT CGACCCGCTC ACCGAGTGCC AGTCCTGCCA CAAGCGCTTC CGTGCCGACC ACCTCACCGA GGCCTACGAG GCCAAGCACG GCAAGCCTCC GGCGAACGGA CTGGCGGACC TCAACTGCCC TCACTGCGGC GCTAAGGGTG CGTTCACCGA GCCGCGGATG TTCAGCGGTC TGCTGCGCAC CTACGTGGGA CCGGTGCAGG ACGAGAGCGG CCTGGCGTTC TTGCGCCCGG AGACCGCGCA GGGCATTTTC ATCAACTACA AGAACGTCGA GCAGTCGTCG CGCCGGAAGA TCCCGTTCGG AATCGCCCAG ATCGGCAAGT CGTTCCGTAA CGAGATCACC CCGGGCAACT TCATCTTCCG CACCCGCGAG TTCGAGCAGA TGGAGGTGGA GTTCTTCGTC CGGCCGGGAA CGGACGAGGA ATGGCACCAG TACTGGATCG ACACGCGGCT GCAGTGGTAC ATCGACCTGG GGATCAACAA GGACAACCTG CGGCTGTACG AGCACCCGAA GGAGAAGCTG TCCCACTACT CCAAGCGGAC CGTGGATATC GAGTACCGGT TCAACTTCGC CGGGAGCGAG TGGGGCGAGC TGGAGGGCAT CGCCAACCGC ACTGACTACG ACCTGTCCAC GCACTCCAAG AGGTCGGGCA CGGACTTGTC CTACTTCGAC CAGGAGACCA ACACACGGTT CATCCCTTAC GTGATCGAGC CGTCGGCGGG TGTCGACCGG ACGATGCTCA CCTTCCTGCT CGACGCCTAC ACCGAGGACG AGGCGCCGAA CGCCAAGGGC AAGATGGAGA AGCGCGTCGT CATGCGGCTG GACCCGCGGC TGGCCCCGGT CAAGGCGGCG GTGCTGCCGC TGTCGCGCAA CGCGGACCTG TCGCCGAAGG CCCGGGACTT GGCCGCGAAG CTGCGCAAGC GGTGGAACGT GGAGTTCGAC GACGCCGGGG CGATCGGCCG CCGCTACCGC CGCCAGGACG AGATCGGCAC CCCGTTCTGC GTGACGATCG ACTTCGACAC GCTGGAAGAC AACGCGGTGA CGGTCCGCGA GCGCGACTCG ATGGCTCAGG AACGCATCTC GATCGACCAG GTCGAGCAGT ACCTCGCGGA GCGGCTCGCC GGGTGCTGA
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Protein sequence | MAAKSEAMDT LVSLAKRRGL VYPSSEIYGG LRASWDYGPL GVELKNNVKR QWWRAMVQER EDIVGLDSCV ILAREVWEAS GHVDAFVDPL TECQSCHKRF RADHLTEAYE AKHGKPPANG LADLNCPHCG AKGAFTEPRM FSGLLRTYVG PVQDESGLAF LRPETAQGIF INYKNVEQSS RRKIPFGIAQ IGKSFRNEIT PGNFIFRTRE FEQMEVEFFV RPGTDEEWHQ YWIDTRLQWY IDLGINKDNL RLYEHPKEKL SHYSKRTVDI EYRFNFAGSE WGELEGIANR TDYDLSTHSK RSGTDLSYFD QETNTRFIPY VIEPSAGVDR TMLTFLLDAY TEDEAPNAKG KMEKRVVMRL DPRLAPVKAA VLPLSRNADL SPKARDLAAK LRKRWNVEFD DAGAIGRRYR RQDEIGTPFC VTIDFDTLED NAVTVRERDS MAQERISIDQ VEQYLAERLA GC
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