| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0852 |
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| Symbol | recO |
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| ID | 3579634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1007016 |
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| End bp | 1007747 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684545 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_288913 |
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| Protein GI | 72161256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.352076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTCT ACCGAGATGA AGGCATCGTC CTTCGTACTC AGGACCTAGG AGAGGCCGAC
CGGATCGTGA CTCTGCTGAC CCGGCGCACC GGGTTGGTCC GCGCGGTCGG CAAGGGGGTG
CGCCGCACCC GGTCCCGCTT CGGGGCGCGC CTCGAACCGT TCACCCACAT CGACGTGCAA
CTCCACGCCG GCAAGAGCCT TGACGTGGTC ACGCAGGTCG ACACCCTGCA CGCGTACGGG
AGTGTCCTGG TCACCGACTA TCCACGCTAC ACCGCGGGGG TCGCGATGCT GGAGACCGCA
GAAAAGGTCG TGAGCGTGGA GAAAGACCCG GCGCTGCGGC AGTTCCTGCT GCTGTGGGGC
GGACTGCGGA CCCTCGCCGA GGGCGCGCAC GACCCCCGCC TGGTCCTCGA CGCCTACCTG
CTGCGCTCCC TCGCCGTCGC CGGCTATGCC CCCGCTCTGG AAGAATGTGC CCATTGCGGT
GTGCCGGGAC CGCACCGGGA GTTCGCGGTG CACGCCGGGG GTATGGTGTG CTCGCTGTGC
CGTCCCGCGG GCTCGGTCAA GCCGTCCCCC GCAGCAGTGG CGCTGATGGT GGCGCTGCTG
CGCGGTGACT GGGAGAGCGC CGATGCGAGC GCTGAGCGGG ACCGCACCGA ATGCAGCGGC
CTGGTCGCCG CCTATCTCCA GTGGCACCTG GAGAACGGAG TCCGATCTTT GCGCCTTGTG
GAGCGTGCGT GA
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| Protein sequence | MSLYRDEGIV LRTQDLGEAD RIVTLLTRRT GLVRAVGKGV RRTRSRFGAR LEPFTHIDVQ
LHAGKSLDVV TQVDTLHAYG SVLVTDYPRY TAGVAMLETA EKVVSVEKDP ALRQFLLLWG
GLRTLAEGAH DPRLVLDAYL LRSLAVAGYA PALEECAHCG VPGPHREFAV HAGGMVCSLC
RPAGSVKPSP AAVALMVALL RGDWESADAS AERDRTECSG LVAAYLQWHL ENGVRSLRLV
ERA
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