Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0806 |
Symbol | |
ID | 3579877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 952332 |
End bp | 954317 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637684499 |
Product | putative acyl-peptide hydrolase |
Protein accession | YP_288867 |
Protein GI | 72161210 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0875582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC GCGTGATCCT GCCCTACGGG AGCTGGTCCT CACCCATCAC CGCGGCCGAC ATCGCCAAAG GTGCTCTCCG TCTCGGTTTC CCCTCTGTCG TCGCCGATGA GATGTGGTGG GAGGAATCCC GACCCGAGGA AGGCGGCCGC ACCACCGTCA TGCACCGCGC TGCTGACGGC ACCGTTACCG AACTCCTGCC CGCCCCGTGG AATGCGCGGA CCCGGGTCCA CGAGTATGGA GGCCGCTCCT ACCTGCCTGT GCCCCGCCGC GACGACAAGG CGATCACCCG CTGGGGCATC GTCTTCGCCA ACTTCTCCGA CCAGCGCCTC TACCTGTTGG AGAAAGGCTC CCGCGAGCCC CGCCCGCTCA CCCCGGAACC GGAGAGCCCG GGTGCGCTCC GCTACGCCGA CTTCGTGCTC TCCCCCGACC GCAAGCACCT CATCTGTGTG CGGGAAAGCC ACGACGGCAC CACCGTCACC CGCGCCATCG TCTCCGTGCC CCTGTCGGGG CGGGCCGCCA CCAACCCGTC GGCGGTCCGC GTCCTGGTGA CCGGGGCCGA CTTCTTCGCC TCCCCGGTGC CGTCACCGGA CGGGACCAAA CTCGCCTGGA TCTCCTGGAG CCACCCACGC ATGCCGTGGC AGGGCACCCA GTTGCGGGTC GCCGACATTC CGGAGACCGG GCCGATCACT ACTTCGCATC CGCTGCGCGG CGGGTTGAAA GAGTCCGTGC TGCACCCGCA GTGGCGGGAC AACGAGACCC TCTGCTTCGT GTCCGACTGG TCCGGCTGGT GGAACCTGTA CGAGACGCGG CTCTACGGGC AGGCGATGGC GCTCTTCCCG GACGAAGCCG AGTTCACGCC GCCGCCATGG CAGTTGGGGA TCACCCCCTA CTGCGTGCTC GACGACGGGC AGCTCATCAC GCTCTACGGC CACGCGGACC TGGGGGTCGG CCGCTACGAT CCCCACACCG CCGACCTCAC CCCGCTCGCT TCGTCGTTCA CAAGCTGGCA CACCCTGGCC AGTGACGGGA AAACCGTGGT CGGTATCGCC GCCTCCCCCA CCGAGCCGAC CAGTCTCGTG CGGCTCAACC CGGAGAACGG GGCGACGACC GTGCTCCGCC GCTCGCTCAC CGAAACCCCC ACCATCGGGT ACCTGCCCAA ACCCCGTACC ACGTCCCTGT CCGGCCGCTA CGGCACCACC GTGCACGCCA ACGTCTACCC GCCCACCAAC CCCGAAATGG AAGGGGAAGG GCCCGCCCCC TACGTCGTCT GGGTGCACGG CGGCCCCACC GGAGCTGCCA CCACCGGGCT CGACCTGCAC AAGGCCTACT TCACCAGCCG CGGGATCGGC ATCATCGACG TCAACTACGG CGGATCCACC GGGTACGGCC GCGCCTACCG GGAACGCCTC GACGGCCAGT GGGGGGTCGT CGACGTGGAA GACGTGGTCG CCGCAGCCCA GAGCCTCGTC GACCAGGGCC TCGCCGACCC CGACCGGCTG GCGATCCGCG GGGGAAGCGC AGGAGGGTTC ACCACTCTGC TCGCACTCAC CCAAGACGTG TTCGCCTGCG GCGTCTCCTA CTACGGCGTC ACCGACCTGC TTCGGCTCGT GCAGGAAACC CACGACTTCG AATCCCGCTA CCTCGACACC CTCATCGGTG TCCTCTCCGG TTACAGCGCC ACCTACCAGG AGCGCTCCCC GATCAACCGG GTCGCGGAGA TCAACGTTCC CGTGCTGCTC CTGCAAGGCG CGGACGACCC TGTCGTCCCA CCGGAGCAGG CCCGGGAATT CGCCGCTGTC CTCAAGGAAC GCGGTGTCCC CCACGTCCTC GTGGAGTTCG AGAACGAAAG CCACGGTTTC CGCAAGCCCG ACACTGTCGC CACCGCGTTG GAGAAGGAGC TTGCCTTCTA CTGCAAAGTG TTCTTCGGGT TCACACCGCC GGGGGTGCCC CCGATCGACC TCGACCTGTC CGCCCCCACC GAATAG
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Protein sequence | MNERVILPYG SWSSPITAAD IAKGALRLGF PSVVADEMWW EESRPEEGGR TTVMHRAADG TVTELLPAPW NARTRVHEYG GRSYLPVPRR DDKAITRWGI VFANFSDQRL YLLEKGSREP RPLTPEPESP GALRYADFVL SPDRKHLICV RESHDGTTVT RAIVSVPLSG RAATNPSAVR VLVTGADFFA SPVPSPDGTK LAWISWSHPR MPWQGTQLRV ADIPETGPIT TSHPLRGGLK ESVLHPQWRD NETLCFVSDW SGWWNLYETR LYGQAMALFP DEAEFTPPPW QLGITPYCVL DDGQLITLYG HADLGVGRYD PHTADLTPLA SSFTSWHTLA SDGKTVVGIA ASPTEPTSLV RLNPENGATT VLRRSLTETP TIGYLPKPRT TSLSGRYGTT VHANVYPPTN PEMEGEGPAP YVVWVHGGPT GAATTGLDLH KAYFTSRGIG IIDVNYGGST GYGRAYRERL DGQWGVVDVE DVVAAAQSLV DQGLADPDRL AIRGGSAGGF TTLLALTQDV FACGVSYYGV TDLLRLVQET HDFESRYLDT LIGVLSGYSA TYQERSPINR VAEINVPVLL LQGADDPVVP PEQAREFAAV LKERGVPHVL VEFENESHGF RKPDTVATAL EKELAFYCKV FFGFTPPGVP PIDLDLSAPT E
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