| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0784 |
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| Symbol | |
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| ID | 3581349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 926033 |
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| End bp | 928336 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684477 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_288845 |
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| Protein GI | 72161188 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGCG TGTATTCTGC CGAGGCCGTC ATCGACAACG GCCGTTTCGG CACCCGTACG
ATCCGCTTCG AGACCGGTCG CCTGGCCCGC CAGGCCACAG GGTCGGCTAC GGCCTACCTT
GACGACGAGA CGATGGTCCT GTCGGCGACG ACCGTGTCGA AGCGCCCCAA GGAGGCCCTG
GACTTCTTCC CGCTCACGGT CGACGTTGAA GAACGCATGT ACGCCGCGGG GCGCATCCCC
GGCTCGTTCT TCCGCAGGGA GGGGCGTCCC TCGGAGGACG CGATCCTCAC CTGCCGGCTC
ATCGACCGGC CGCTGCGTCC GTCCTTCCAG AAAGGGCTGC GCAACGAGAT CCAAATCGTT
GCGACCGTGC TGGCCCTGCA CCCGGACCAT CTCTACGACG TCATCGCGAT CAACGCCGCG
TCGATGTCCA CCCAGCTTGC CGGACTGCCG TTCTCCGGCC CGATCGGCGG CGTGCGGGTG
GCCCTGGTCG AAGGCCAGTG GGTGGCGTTT CCCACGCACT CGGAGCTGGC CAACGCCACG
TTCGACATGG TCGTGGCCGG CCGGGTGCTG GACAACGGCG ACGTCGCGAT CATGATGGTG
GAGGCCGAGT CCACCCCGCA CACCCTGCGA CTGGTGGCGG AGGGAGCGAT CGGCCCCAAC
GAGCAGACCG TCGCGGAAGG CTTGGAAGCC GCCAAGCCGT TCATCAAGGT GCTGTGCCGC
GCCCAGCAGA CCGTGGCTGA GGCCGCGGGC AAGCCGCCCG GCGAGTACCC GATCTTCATC
GACTACCAGG ACGACGCGTA CGCCGCCGTC GAGGAAGCGA TCCATGACGA GCTCGCCGCG
GCGCTCACGA TCGCGGACAA GCAGGAGCGG GAAGCCGAAC TCGACCGGGT CAAGGCGCTG
GTCGCCGAGA AGCTCGCCGA GGACTTCGAA GGCCGCGAAA AGGAGCTGGC CGCAGCGTTC
CGCGCGCTCA CCCGGAAGCT GGTGCGGGAG CGGATCGTCA AGGACGGGGT CCGTATCGAC
GGCCGCGGTG TGAAGGACAT CCGGTCTCTC ACCGCCGAAG TCAACGTCAT TCCGCGCGTG
CACGGGTCGG CCTTGTTCGA GCGCGGGGAA ACCCAGATCC TGGGGATCAC CACGCTGAAC
ATGCTCCGCA TGGAGCAGAC CATCGACACG CTCAACCCGG AGCGCACCAA GCGCTACATG
CACAACTACA ACTTCCCGCC GTACTCCACG GGGGAGACCG GGCGGGTCGG CGCGCCGAAG
CGCCGCGAGA TCGGGCACGG GGCGCTCGCC GAACGCGCTC TCGTCCCGGT GCTGCCGTCG
CGGGAAGAGT TCCCCTACGC GATCCGGCAG GTGTCGGAGG CGATCGGCTC CAACGGCTCC
ACGTCGATGG GGTCGGTGTG CGCCTCCACC ATGTCGCTGA TGGCGGCGGG TGTGCCGCTC
AAGGACATGG TGGCCGGTAT CGCCATGGGC TTGATCTACG AGGACGGCAA GTACGTCACC
CTTACCGACA TCCTCGGTGC GGAAGACGCC TACGGTGACA TGGACTTCAA GGTCGCGGGC
ACGCGCGACC TCATCACCGC GCTGCAGTTG GACACCAAGC TCGACGGGAT CCCCGCCGAG
GTGCTGGCGT CCGCGCTGCA GCAGGCCCGC GGGGCGCGGC TGGCCATCCT CGACGTCATG
TCGGAGGCCA TCAACCGGCC CGCTGAGATC AGTCCGCACG CGCCGCGTAT CCTTACGGTC
AAGGTGCCGA TCGACAAGAT CGGCGAGGTC ATCGGCCCCA AGGGCAAGAT GATCAACTCG
ATCCAGGACG AGACCGGCGC CGAAATCACC ATCGAGGACG ACGGCACCAT CTACATCGGC
GCCACCGACG GGCCGTCCGC GGAGGCCGCC CGCGACGCCA TCAACAGCAT CGCCAACCCG
ACCATGCCCG AGGTCGGGGA ACGCTACCTC GGCACGGTCG TGAAGACCAC CGCGTTCGGG
GCCTTCGTGT CGCTGCTGCC CGGCAAGGAC GGGCTGCTGC ACATCTCGCA GATCCGCAAG
ATGCACGGCG GCCAGCGGAT TGAGAACGTC GAAGATGTCA TCAGCATCGG GGAGAAAATC
CACGTCGAAG TCCGGGACAT CGACGAACGG GGCAAGCTCT CCCTGGTGCC CGTCGAAGTC
ATCGAAGCTG AAGCTGTTGC CGCCCCCAAC GGCGGGGAGA GCCCGAACGG GGCGAAGAAG
ACCGACGCCA GCGGCAACGG CGCCAAGCAG CCGCGCCGCC GTCGCCGCAC CCGGTCGTCC
AGCCGTTCCA GTGAGAACAC CTGA
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| Protein sequence | MEGVYSAEAV IDNGRFGTRT IRFETGRLAR QATGSATAYL DDETMVLSAT TVSKRPKEAL
DFFPLTVDVE ERMYAAGRIP GSFFRREGRP SEDAILTCRL IDRPLRPSFQ KGLRNEIQIV
ATVLALHPDH LYDVIAINAA SMSTQLAGLP FSGPIGGVRV ALVEGQWVAF PTHSELANAT
FDMVVAGRVL DNGDVAIMMV EAESTPHTLR LVAEGAIGPN EQTVAEGLEA AKPFIKVLCR
AQQTVAEAAG KPPGEYPIFI DYQDDAYAAV EEAIHDELAA ALTIADKQER EAELDRVKAL
VAEKLAEDFE GREKELAAAF RALTRKLVRE RIVKDGVRID GRGVKDIRSL TAEVNVIPRV
HGSALFERGE TQILGITTLN MLRMEQTIDT LNPERTKRYM HNYNFPPYST GETGRVGAPK
RREIGHGALA ERALVPVLPS REEFPYAIRQ VSEAIGSNGS TSMGSVCAST MSLMAAGVPL
KDMVAGIAMG LIYEDGKYVT LTDILGAEDA YGDMDFKVAG TRDLITALQL DTKLDGIPAE
VLASALQQAR GARLAILDVM SEAINRPAEI SPHAPRILTV KVPIDKIGEV IGPKGKMINS
IQDETGAEIT IEDDGTIYIG ATDGPSAEAA RDAINSIANP TMPEVGERYL GTVVKTTAFG
AFVSLLPGKD GLLHISQIRK MHGGQRIENV EDVISIGEKI HVEVRDIDER GKLSLVPVEV
IEAEAVAAPN GGESPNGAKK TDASGNGAKQ PRRRRRTRSS SRSSENT
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