| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0579 |
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| Symbol | |
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| ID | 3581277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 659783 |
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| End bp | 661492 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684269 |
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| Product | signal peptide peptidase A |
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| Protein accession | YP_288640 |
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| Protein GI | 72160983 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.766562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGCCG CAAAGCTGTT CGACCCTCTG ACCACAATCC GGCGTCGGCG CACTGCCCCG
CTGGTCCTGG AATTGGACCT GACGGAGGGG ATGATTGACG AACCGCCGGG TGACCCCCTC
AGCCAGATCA TGGCGATGCG GCGGCAACGG CTGTTCGACA TCGTCGAAGG CATTCGGCGC
GGGGCCCACG ACCCCCGGGT CAAAGCCTTG ATCGTCAAGA TCGGCTCCCA GTCGCTGGGC
ATGGCCCTGG TGCAGGAGCT GCGCCAGGCC GTAGCCATGT TCCGCCGGGC AGGCAAGCAC
ACGGTGGCGT GGAGCGAGTC GTTCGGAGAG TTCGGCCCCG GTTCGCTCCC CTACTATCTG
GCCACCGCGT TCGACGAGAT CGCGCTGCTG CCTTCCGGTT CGGTGGGGCT GACCGGGCTG
CGGGTGGAGA ACCTGTTCTT CGCCGAGGCC CTGGAGAAGC TCGGTGTCGA CTACCAGGGC
GGCGCCCGGC ACGAGTACAA GACCGCGCTC AACATGTTCA CGGAGCGCGG TTTCACCGAC
GCGCACCGGG AGGCGAGCGG CCGCATCGTG GAATCCCTCA CCGAGCAGTT GGTGGCGGGG
ATCAGCAGCG GCCGTGACTT GTCCGAGGAG CGGGTGCGCG AGCTCATCGA CCAGGGGCCG
TTCCTCGCCA CCGAGGCGGT GGAAGCGGGC CTCGTCGACA AGGTCGCCTA CCGGGACGAG
ATCTACTCCG ACCTGCTGGA CCGCTACTCC GCCGACGGCA CTCCCGCCCA CTTGCAGTAC
GTCTCCCGCT ACCAGCGGAC CCGGTCCCTG GCCGACCGCG TGCCGGTCGC GCAGCGCAGC
GGATATGTGG CCCTCATCTC CGGGGTGGGG CAGATCGTCA CTGGGCGGAG CCGCCGCTCA
CCGCTGGGCG GGGGCGCAGT CATGGGTTCG GACACGGTGG CCGCAGCGTT CCGCGCGGCC
CGCAAGGACC CGAACGTCCG CGCCGTAGTG TTCCGGGTGA ACAGCCCGGG CGGCTCCTAC
ACCGCGTCCG ATGTGATCTG GCGCGAAGTG GTGCTGACCA GCCAGGCGGG TACCCCGGTC
GTGGTGTCGA TGGGCGACGT CGCCGGGTCG GGCGGCTACT TCATTGCCGC GGGTGCTGAC
GTCATCATCG CGCAGCCGGG GACGATCACC GGGTCGATCG GTGTGGTGGT CGGCAAGGCC
GTGCTGTCGA CCATGCTCGC CAAGCTCGGG GTCACCAGCG ACTGGATCGA CAGTGGCAAC
CACGCGGGCA TGTTCAGCCC GAACCGCCCG TTCAGCGAGT CCGAGTGGGA GCGCGTCAAC
ACGATGCTCG ACCACATCTA CGACGACTTC GTGGGCAAGG TCGCTGAGGG CCGGAAGATG
ACCCGCGACC AGGTCCACGA GGTGGCCAAG GGCCGGATCT GGACTGGTCA GGACGCGTGC
GAGCGGGGCC TGGTGGACGA GGTCGGCGGA TTGGAGACCG CGATCCGCAT CGCACGGGAC
CGGGGTGGGC TGCCTCCGTC CGCTCCGGTG CGGCACTTCC CCCAGCTGGG TCCGCTCGAG
CGTCTGATTC CGGCGGAGTC CAGTGAGGAC CGGACCGCTC AGGCACAGTT GCGGTTGAGC
GGGTGGGGGC CGCTGGCGGA ACTGTCGGCA CGTCTGGGCC TGCCGGCGGC GGGGCCGCTG
GTGATGCCGG GCACGTGGGA GATCCGGTGA
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| Protein sequence | MDAAKLFDPL TTIRRRRTAP LVLELDLTEG MIDEPPGDPL SQIMAMRRQR LFDIVEGIRR
GAHDPRVKAL IVKIGSQSLG MALVQELRQA VAMFRRAGKH TVAWSESFGE FGPGSLPYYL
ATAFDEIALL PSGSVGLTGL RVENLFFAEA LEKLGVDYQG GARHEYKTAL NMFTERGFTD
AHREASGRIV ESLTEQLVAG ISSGRDLSEE RVRELIDQGP FLATEAVEAG LVDKVAYRDE
IYSDLLDRYS ADGTPAHLQY VSRYQRTRSL ADRVPVAQRS GYVALISGVG QIVTGRSRRS
PLGGGAVMGS DTVAAAFRAA RKDPNVRAVV FRVNSPGGSY TASDVIWREV VLTSQAGTPV
VVSMGDVAGS GGYFIAAGAD VIIAQPGTIT GSIGVVVGKA VLSTMLAKLG VTSDWIDSGN
HAGMFSPNRP FSESEWERVN TMLDHIYDDF VGKVAEGRKM TRDQVHEVAK GRIWTGQDAC
ERGLVDEVGG LETAIRIARD RGGLPPSAPV RHFPQLGPLE RLIPAESSED RTAQAQLRLS
GWGPLAELSA RLGLPAAGPL VMPGTWEIR
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