Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0506 |
Symbol | |
ID | 3579917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 572345 |
End bp | 573418 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637684194 |
Product | hypothetical protein |
Protein accession | YP_288567 |
Protein GI | 72160910 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00681957 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGGG GCCGTGACAC GGCCGGTCCC CGATGGCGTG CACCGGCCAC GGCAGCTGTG CTGTGCCTGC TGCTGTGCCT GGTATCCGTC GCCGTTGTCG GCGACTCTGC CGACCGTCCC GCGGGACGGC GCGGCGGGGA CGGCATGGCG GTCCTGCGGC GCGCCGCAGA GACCAGCGTC CGCCTCTCCT ACCAGGGGGT CCGCGTGGTG TCCTGGGTCG ACAGCACGGG CCGCACGGAA ACCGCCCGGC TGAACATCCT CCACCAGCCC GGCGTGGGCA CGCTGGTCAG TCCACTCCAC GACACCGGGG AAGGCACCAA CCTGCTGGTC GGATCAACCC CCTGGGGCAG GGTGGGCAAA GACGTGCTCG ACGTGCTGGA AACCAACTTC TGGGTCCGCA CCGAAGGGGA AACCCAGATT GGGCAGCGCT CCGCCGTGGG TGTGGTCGCC CAACGGGACA ACGGGCAGGT CGCGGCCCGC TTCTGGACCG ATGAGCACAC CGGGCTGCTG CTGCGTCGCG AAGTGTACGA CATCAGCGGG GAAGTCGCGC AGACCAGCGT GTTCGAATCC ATCCAGTTCG GTGTGGACGC GGCCGCGCTT GCCGAGGAGA CACGACAGCC CGACGTCGTC AGCCGACCCT GGGGCGACGA ACTCGACCCG CAGGAACTCC GCCAGTTGCG AGACGAAGGC TGGGTGCTGC CGGAACGGCT GCTGTGGGGC TTCGAACTGG TTGAGGCCCG CGCCACCGGC GAAGGAGACG AGCGGATCAC CCACCTGACC TACTCCGACG GGATCAGCGT GATCTCCGTG TTCACCCAGC GCGGCAGCCT CGGCGGGGCA GCGGTCACCG GGCTGCGCCG GACCGAAGAG GACGGCGCCC TCGTCCACGT CGCCGACGAA GGCGGCCAGC ACCAGCGGAT CTGGGAAGCG GACGGGTTCG TGCACACGGT GCTCGCCGAC GCGCCAGCGG GTCTCGTCGC CGACGTCCTC CACGCGCTGC CCCCGCCCGA CCGCCACGGT TTCTGGGAGC GAGTCGGTCG AGGTTTCGAA CGCGTGGGAA CGTGGCTCGA CTAA
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Protein sequence | MSGGRDTAGP RWRAPATAAV LCLLLCLVSV AVVGDSADRP AGRRGGDGMA VLRRAAETSV RLSYQGVRVV SWVDSTGRTE TARLNILHQP GVGTLVSPLH DTGEGTNLLV GSTPWGRVGK DVLDVLETNF WVRTEGETQI GQRSAVGVVA QRDNGQVAAR FWTDEHTGLL LRREVYDISG EVAQTSVFES IQFGVDAAAL AEETRQPDVV SRPWGDELDP QELRQLRDEG WVLPERLLWG FELVEARATG EGDERITHLT YSDGISVISV FTQRGSLGGA AVTGLRRTEE DGALVHVADE GGQHQRIWEA DGFVHTVLAD APAGLVADVL HALPPPDRHG FWERVGRGFE RVGTWLD
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